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Federico E. Rey et al.
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Falk Hildebrand et al.
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Brian J. Haas et al.
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Manimozhiyan Arumugam et al.
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Harry J. Flint et al.
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Weizhong Li et al.
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T. Z. DeSantis et al.
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R Inoue et al.
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P Lepage et al.
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A Fite et al.
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Y Benjamini et al.
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