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Marco Punta et al.
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Brittany Burton et al.
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Molecular basis of purine-rich RNA recognition by the human SR-like protein Tra2-β1
Antoine Clery et al.
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A series of PDB related databases for everyday needs
Robbie P. Joosten et al.
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Jeremy Bellay et al.
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Sapna Ravindranathan et al.
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NAPS: a residue-level nucleic acid-binding prediction server
Matthew B. Carson et al.
NUCLEIC ACIDS RESEARCH (2010)
Proteome-Wide Search Reveals Unexpected RNA-Binding Proteins in Saccharomyces cerevisiae
Nikoleta G. Tsvetanova et al.
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Structural basis for subversion of cellular control mechanisms by the adenoviral E1A oncoprotein
Josephine C. Ferreon et al.
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Joerg Gsponer et al.
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Protein Dynamism and Evolvability
Nobuhiko Tokuriki et al.
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Cheng-Wei Cheng et al.
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The unfoldomics decade: an update on intrinsically disordered proteins
A. Keith Dunker et al.
BMC GENOMICS (2008)
Secondary structure based analysis and classification of biological interfaces: identification of binding motifs in protein-protein interactions
Mainak Guharoy et al.
BIOINFORMATICS (2007)
Predicting functionally important residues from sequence conservation
John A. Capra et al.
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Jose Manuel Perez-Canadillas
EMBO JOURNAL (2006)
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
BIOINFORMATICS (2006)
Conservation of intrinsic disorder in protein domains and families: II. Functions of conserved disorder
JW Chen et al.
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Arginine-rich motifs present multiple interfaces for specific binding by RNA
TS Bayer et al.
RNA (2005)
The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins
Z Dosztányi et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
The universal protein resource (UniProt)
A Bairoch et al.
NUCLEIC ACIDS RESEARCH (2005)
Analysis of ordered and disordered protein complexes reveals structural features discriminating between stable and unstable monomers
K Gunasekaran et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
PDB file parser and structure class implemented in Python
T Hamelryck et al.
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Moonlighting proteins: old proteins learning new tricks
CJ Jeffery
TRENDS IN GENETICS (2003)
hnRNP-G promotes exon 7 inclusion of survival motor neuron (SMN) via direct interaction with Htra2-β1
Y Hofmann et al.
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Predicting changes in the stability of proteins and protein complexes: A study of more than 1000 mutations
R Guerois et al.
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SRp30c-dependent stimulation of survival motor neuron (SMN) exon 7 inclusion is facilitated by a direct interaction with hTra2 beta 1
PJ Young et al.
HUMAN MOLECULAR GENETICS (2002)
Structural basis for recognition of AU-rich element RNA by the HuD protein
XQ Wang et al.
NATURE STRUCTURAL BIOLOGY (2001)
Molecular basis of sequence-specific recognition of pre-ribosomal RNA by nucleolin
FHT Allain et al.
EMBO JOURNAL (2000)
An RNA-Binding chameleon
CA Smith et al.
MOLECULAR CELL (2000)
Induced fit in RNA-protein recognition
JR Williamson
NATURE STRUCTURAL BIOLOGY (2000)
Speeding molecular recognition by using the folding funnel: The fly-casting mechanism
BA Shoemaker et al.
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Contributions of basic residues to ribosomal protein L11 recognition of RNA
D GuhaThakurta et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
The Protein Data Bank
HM Berman et al.
NUCLEIC ACIDS RESEARCH (2000)