相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。MemBuilder: a web-based graphical interface to build heterogeneously mixed membrane bilayers for the GROMACS biomolecular simulation program
Mohammad Mehdi Ghahremanpour et al.
BIOINFORMATICS (2014)
Bridging Molecular Docking to Membrane Molecular Dynamics To Investigate GPCR-Ligand Recognition: The Human A(2A) Adenosine Receptor as a Key Study
Davide Sabbadin et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2014)
Using caffeine and other adenosine receptor antagonists and agonists as therapeutic tools against neurodegenerative diseases: A review
Marla Rivera-Oliver et al.
LIFE SCIENCES (2014)
Conformational Fluctuations of UreG, an Intrinsically Disordered Enzyme
Francesco Musiani et al.
BIOCHEMISTRY (2013)
A Molecular Dynamics Simulation-Based Interpretation of Nuclear Magnetic Resonance Multidimensional Heteronuclear Spectra of α-Synuclein.Dopamine Adducts
Domenica Dibenedetto et al.
BIOCHEMISTRY (2013)
Influence of Lipid Composition on the Structural Stability of G-Protein Coupled Receptor
Md. Iqbal Mahmood et al.
CHEMICAL & PHARMACEUTICAL BULLETIN (2013)
Molecular Dynamics Simulations of the Adenosine A2a Receptor: Structural Stability, Sampling, and Convergence
Hui Wen Ng et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2013)
Ligand-Dependent Activation and Deactivation of the Human Adenosine A2A Receptor
Jianing Li et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)
Antagonist binding and induced conformational dynamics of GPCR A2A adenosine receptor
Xueqin Pang et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2013)
The role of the lipid matrix for structure and function of the GPCR rhodopsin
Olivier Soubias et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2012)
Artificial membrane-like environments for in vitro studies of purified G-protein coupled receptors
Eugene Serebryany et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2012)
Structure, dynamics, and hydration of POPC/POPS bilayers suspended in NaCl, KCl, and CsCl solutions
Piotr Jurkiewicz et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2012)
Agonist Dynamics and Conformational Selection during Microsecond Simulations of the A2A Adenosine Receptor
Ji Young Lee et al.
BIOPHYSICAL JOURNAL (2012)
Local Fluctuations and Conformational Transitions in Proteins
Rocco Caliandro et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
An Extension and Further Validation of an All-Atomistic Force Field for Biological Membranes
Joakim P. M. Jambeck et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
Discovery of 1,2,4-Triazine Derivatives as Adenosine A2A Antagonists using Structure Based Drug Design
Miles Congreve et al.
JOURNAL OF MEDICINAL CHEMISTRY (2012)
Derivation and Systematic Validation of a Refined All-Atom Force Field for Phosphatidylcholine Lipids
Joakim P. M. Jambeck et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2012)
Predictions for Cholesterol Interaction Sites on the A2A Adenosine Receptor
Ji Young Lee et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Caffeine for treatment of Parkinson disease A randomized controlled trial
Ronald B. Postuma et al.
NEUROLOGY (2012)
Membrane-Sensitive Conformational States of Helix 8 in the Metabotropic Glu2 Receptor, a Class C GPCR
Agostino Bruno et al.
PLOS ONE (2012)
Structural Basis for Allosteric Regulation of GPCRs by Sodium Ions
Wei Liu et al.
SCIENCE (2012)
Molecular Dynamics Simulations Reveal Insights into Key Structural Elements of Adenosine Receptors
David Rodriguez et al.
BIOCHEMISTRY (2011)
Adenosine receptors and brain diseases: Neuroprotection and neurodegeneration
Catarina V. Gomes et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2011)
LigPlot+: Multiple Ligand-Protein Interaction Diagrams for Drug Discovery
Roman A. Laskowski et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2011)
Computational Study of the Binding Modes of Caffeine to the Adenosine A2A Receptor
Yuli Liu et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2011)
Agonist-bound adenosine A2A receptor structures reveal common features of GPCR activation
Guillaume Lebon et al.
NATURE (2011)
Past, present and future of A2A adenosine receptor antagonists in the therapy of Parkinson's disease
Marie Therese Armentero et al.
PHARMACOLOGY & THERAPEUTICS (2011)
Structure of an Agonist-Bound Human A2A Adenosine Receptor
Fei Xu et al.
SCIENCE (2011)
Structure of the Adenosine A2A Receptor in Complex with ZM241385 and the Xanthines XAC and Caffeine
Andrew S. Dore et al.
STRUCTURE (2011)
Adenosine receptors interacting proteins (ARIPs): Behind the biology of adenosine signaling
Francisco Ciruela et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2010)
Contribution of Membrane Elastic Energy to Rhodopsin Function
Olivier Soubias et al.
BIOPHYSICAL JOURNAL (2010)
GridMAT-MD: A Grid-Based Membrane Analysis Tool for Use With Molecular Dynamics
William J. Allen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2009)
Optimized Molecular Dynamics Force Fields Applied to the Helix-Coil Transition of Polypeptides
Robert B. Best et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2009)
Structural and dynamic effects of cholesterol at preferred sites of interaction with rhodopsin identified from microsecond length molecular dynamics simulations
George Khelashvili et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2009)
A Role for a Specific Cholesterol Interaction in Stabilizing the Apo Configuration of the Human A2A Adenosine Receptor
Edward Lyman et al.
STRUCTURE (2009)
Internal hydration increases during activation of the G-protein-coupled receptor rhodopsin
Alan Grossfield et al.
JOURNAL OF MOLECULAR BIOLOGY (2008)
Caffeine activates the PI3K/Akt pathway and prevents apoptotic cell death in a Parkinson's disease model of SH-SY5Y cells
Kazuhiro Nakaso et al.
NEUROSCIENCE LETTERS (2008)
The 2.6 Angstrom Crystal Structure of a Human A2A Adenosine Receptor Bound to an Antagonist
Veli-Pekka Jaakola et al.
SCIENCE (2008)
The condensing effect of cholesterol in lipid bilayers
Wei-Chin Hung et al.
BIOPHYSICAL JOURNAL (2007)
Setting up and running molecular dynamics simulations of membrane proteins
Christian Kandt et al.
METHODS (2007)
Opinion - How many drug targets are there?
John P. Overington et al.
NATURE REVIEWS DRUG DISCOVERY (2006)
Statistical potential for assessment and prediction of protein structures
Min-Yi Shen et al.
PROTEIN SCIENCE (2006)
Molecular dynamics simulation of a phosphatidylglycerol membrane
DE Elmore
FEBS LETTERS (2006)
GROMACS: Fast, flexible, and free
D Van der Spoel et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)
The Amber biomolecular simulation programs
DA Case et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)
Phosphatidylethanolamine-phosphatidylglycerol bilayer as a model of the inner bacterial membrane
K Murzyn et al.
BIOPHYSICAL JOURNAL (2005)
Development and testing of a general amber force field
JM Wang et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Structural studies of the putative helix 8 in the human β2 adrenergic receptor:: an NMR study
M Katragadda et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2004)
Cholesterol modulates ligand binding and G-protein coupling to serotonin 1A receptors from bovine hippocampus
TJ Pucadyil et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2004)
Role of cholesterol in synapse formation and function
FW Pfrieger
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2003)
Manipulation of cholesterol levels in rod disk membranes by methyl-β-cyclodextrin.: Effects on receptor activation.
SL Niu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Activation of the β2-adrenergic receptor involves disruption of an ionic lock between the cytoplasmic ends of transmembrane segments 3 and 6
JA Ballesteros et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Association of coffee and caffeine intake with the risk of Parkinson disease
GW Ross et al.
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION (2000)
分享论文
