4.6 Article

Application of Ion Torrent Sequencing to the Assessment of the Effect of Alkali Ballast Water Treatment on Microbial Community Diversity

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Microbiology

Alishewanella solinquinati sp nov., Isolated from Soil Contaminated with Textile Dyes

Yogesh M. Kolekar et al.

CURRENT MICROBIOLOGY (2013)

Article Pathology

Combining Highly Multiplexed PCR with Semiconductor-Based Sequencing for Rapid Cancer Genotyping

Carol Beadling et al.

JOURNAL OF MOLECULAR DIAGNOSTICS (2013)

Article Biochemical Research Methods

Rapid deep sequencing of patient-derived HIV with ion semiconductor technology

Max W. Chang et al.

JOURNAL OF VIROLOGICAL METHODS (2013)

Letter Biotechnology & Applied Microbiology

Updating benchtop sequencing performance comparison

Sebastian Juenemann et al.

NATURE BIOTECHNOLOGY (2013)

Article Multidisciplinary Sciences

Bactericidal efficacy of elevated pH on fish pathogenic and environmental bacteria

Clifford E. Starliper et al.

JOURNAL OF ADVANCED RESEARCH (2013)

Article Biotechnology & Applied Microbiology

Next-Generation Sequencing of Microbial Communities in the Athabasca River and Its Tributaries in Relation to Oil Sands Mining Activities

Etienne Yergeau et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)

Review Biochemical Research Methods

Progress in Ion Torrent semiconductor chip based sequencing

Barry Merriman et al.

ELECTROPHORESIS (2012)

Article Biochemical Research Methods

Microbial 16S rRNA Ion Tag and community metagenome sequencing using the Ion Torrent (PGM) Platform

Andrew S. Whiteley et al.

JOURNAL OF MICROBIOLOGICAL METHODS (2012)

Review Microbiology

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

Nicholas J. Loman et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Article Biochemistry & Molecular Biology

Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses

V. G. Fonseca et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biotechnology & Applied Microbiology

Generation of Multimillion-Sequence 16S rRNA Gene Libraries from Complex Microbial Communities by Assembling Paired-End Illumina Reads

Andrea K. Bartram et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)

Article Biochemical Research Methods

UCHIME improves sensitivity and speed of chimera detection

Robert C. Edgar et al.

BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

Brian J. Haas et al.

GENOME RESEARCH (2011)

Article Biochemistry & Molecular Biology

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Review Biochemistry & Molecular Biology

Field guide to next-generation DNA sequencers

Travis C. Glenn

MOLECULAR ECOLOGY RESOURCES (2011)

Article Environmental Sciences

Potential risk of harmful algae transport by ballast waters: The case of Bilbao Harbour

Ainhize Butron et al.

MARINE POLLUTION BULLETIN (2011)

Article Multidisciplinary Sciences

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

J. Gregory Caporaso et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Microbiology

Alishewanella agri sp. nov., isolated from landfill soil

Min-Soo Kim et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)

Letter Biochemical Research Methods

QIIME allows analysis of high-throughput community sequencing data

J. Gregory Caporaso et al.

NATURE METHODS (2010)

Review Genetics & Heredity

APPLICATIONS OF NEXT-GENERATION SEQUENCING Sequencing technologies - the next generation

Michael L. Metzker

NATURE REVIEWS GENETICS (2010)

Article Biotechnology & Applied Microbiology

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Patrick D. Schloss et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

Christian L. Lauber et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)

Article Microbiology

Alishewanella jeotgali sp nov., isolated from traditional fermented food, and emended description of the genus Alishewanella

Min-Soo Kim et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)

Article Microbiology

Alishewanella aestuarii sp nov., isolated from tidal flat sediment, and emended description of the genus Alishewanella

Seong Woon Roh et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)

Article Biochemistry & Molecular Biology

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

J. R. Cole et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Multidisciplinary Sciences

Bacterial Community Variation in Human Body Habitats Across Space and Time

Elizabeth K. Costello et al.

SCIENCE (2009)

Article Multidisciplinary Sciences

Accurate whole human genome sequencing using reversible terminator chemistry

David R. Bentley et al.

NATURE (2008)

Article Biochemical Research Methods

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

Micah Hamady et al.

NATURE METHODS (2008)

Article Multidisciplinary Sciences

The influence of sex, handedness, and washing on the diversity of hand surface bacteria

Noah Fierer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Microbial population structures in the deep marine biosphere

Julie A. Huber et al.

SCIENCE (2007)

Article Biotechnology & Applied Microbiology

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

Qiong Wang et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Environmental Sciences

Potential microbial bioinvasions via ships' ballast water, sediment, and biofilm

Lisa A. Drake et al.

MARINE POLLUTION BULLETIN (2007)

Article Biotechnology & Applied Microbiology

Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities

Catherine A. Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Multidisciplinary Sciences

Microbial diversity in the deep sea and the underexplored rare biosphere

Mitchell L. Sogin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Prospects for inferring very large phylogenies by using the neighbor-joining method

K Tamura et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Review Biochemical Research Methods

Review and re-analysis of domain-specific 16S primers

GC Baker et al.

JOURNAL OF MICROBIOLOGICAL METHODS (2003)