There is strong evidence that the amyloid-beta peptide (Ab) plays a central role in the pathogenesis of Alzheimer's disease (AD). In this context, a detailed quantitative description of the interactions with different Ab species is essential for characterization of physiological and artificial ligands. However, the high aggregation propensity of Ab in concert with its susceptibility to structural changes due to even slight changes in solution conditions has impeded surface plasmon resonance (SPR) studies with homogeneous Ab conformer species. Here, we have adapted the experimental procedures to state-of-the-art techniques and established novel approaches to reliably overcome the aforementioned challenges. We show that the application of density gradient centrifugation (DGC) for sample purification and the use of a single chain variable fragment (scFv) of a monoclonal antibody directed against the amino-terminus of Ab allows reliable SPR measurements and quality control of the immobilized Ab aggregate species at any step throughout the experiment.
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