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Weijun Luo et al.
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Da Wei Huang et al.
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Bradley Efron et al.
ANNALS OF APPLIED STATISTICS (2007)
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Adi L. Tarca et al.
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Jelle J. Goeman et al.
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S. Falcon et al.
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Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
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L Tian et al.
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Pathway level analysis of gene expression using singular value decomposition
J Tomfohr et al.
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Significance analysis of functional categories in gene expression studies: a structured permutation approach
WT Barry et al.
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Reactome: a knowledgebase of biological pathways
G Joshi-Tope et al.
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T Beissbarth et al.
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PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
VK Mootha et al.
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P Khatri et al.
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