相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。VirusSeq: software to identify viruses and their integration sites using next-generation sequencing of human cancer tissue
Yunxin Chen et al.
BIOINFORMATICS (2013)
READSCAN: a fast and scalable pathogen discovery program with accurate genome relative abundance estimation
Raeece Naeem et al.
BIOINFORMATICS (2013)
ViralFusionSeq: accurately discover viral integration events and reconstruct fusion transcripts at single-base resolution
Jing-Woei Li et al.
BIOINFORMATICS (2013)
The presence of Merkel cell polyomavirus is associated with deregulated expression of BRAF and Bcl-2 genes in non-small cell lung cancer
I. Lasithiotaki et al.
INTERNATIONAL JOURNAL OF CANCER (2013)
Rapid identification of non-human sequences in high-throughput sequencing datasets
Aparna Bhaduri et al.
BIOINFORMATICS (2012)
The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients
Zhaoshi Jiang et al.
GENOME RESEARCH (2012)
Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma
Wing-Kin Sung et al.
NATURE GENETICS (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Recurrent Targeted Genes of Hepatitis B Virus in the Liver Cancer Genomes Identified by a Next-Generation Sequencing-Based Approach
Dong Ding et al.
PLOS GENETICS (2012)
Hybrid Capture and Next-Generation Sequencing Identify Viral Integration Sites from Formalin-Fixed, Paraffin-Embedded Tissue
Eric J. Duncavage et al.
JOURNAL OF MOLECULAR DIAGNOSTICS (2011)
Human Papillomavirus Type 16 (HPV-16) Genomes Integrated in Head and Neck Cancers and in HPV-16-Immortalized Human Keratinocyte Clones Express Chimeric Virus-Cell mRNAs Similar to Those Found in Cervical Cancers
Michael J. Lace et al.
JOURNAL OF VIROLOGY (2011)
PathSeq: software to identify or discover microbes by deep sequencing of human tissue
Aleksandar D. Kostic et al.
NATURE BIOTECHNOLOGY (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
CREST maps somatic structural variation in cancer genomes with base-pair resolution
Jianmin Wang et al.
NATURE METHODS (2011)
The Mutational Landscape of Head and Neck Squamous Cell Carcinoma
Nicolas Stransky et al.
SCIENCE (2011)
SVDetect: a tool to identify genomic structural variations from paired-end and mate-pair sequencing data
Bruno Zeitouni et al.
BIOINFORMATICS (2010)
Fast and accurate long-read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
Genome Information Broker for Viruses (GIB-V): database for comparative analysis of virus genomes
Masaki Hirahata et al.
NUCLEIC ACIDS RESEARCH (2007)
分享论文
