相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。The immune gene repertoire of an important viral reservoir, the Australian black flying fox
Anthony T. Papenfuss et al.
BMC GENOMICS (2012)
Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis
John E. McCormack et al.
GENOME RESEARCH (2012)
Tacaribe Virus Causes Fatal Infection of An Ostensible Reservoir Host, the Jamaican Fruit Bat
Ann Cogswell-Hawkinson et al.
JOURNAL OF VIROLOGY (2012)
Resolution of the laurasiatherian phylogeny: Evidence from genomic data
Mariana F. Nery et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2012)
KEGG for integration and interpretation of large-scale molecular data sets
Minoru Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2012)
Phylogenomic Analysis Resolves the Interordinal Relationships and Rapid Diversification of the Laurasiatherian Mammals
Xuming Zhou et al.
SYSTEMATIC BIOLOGY (2012)
morePhyML: Improving the phylogenetic tree space exploration with PhyML 3
Alexis Criscuolo
MOLECULAR PHYLOGENETICS AND EVOLUTION (2011)
A high-resolution map of human evolutionary constraint using 29 mammals
Kerstin Lindblad-Toh et al.
NATURE (2011)
Junin virus. A XXI century update
Ricardo M. Gomez et al.
MICROBES AND INFECTION (2011)
miRBase: integrating microRNA annotation and deep-sequencing data
Ana Kozomara et al.
NUCLEIC ACIDS RESEARCH (2011)
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
Vincent Ranwez et al.
PLOS ONE (2011)
Estimating Species Trees from Unrooted Gene Trees
Liang Liu et al.
SYSTEMATIC BIOLOGY (2011)
ANALYZING MODULAR RNA STRUCTURE REVEALS LOW GLOBAL STRUCTURAL ENTROPY IN MICRORNA SEQUENCE
Timothy I. Shaw et al.
JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY (2011)
AQUA: automated quality improvement for multiple sequence alignments
Jean Muller et al.
BIOINFORMATICS (2010)
Emerging diseases in Chiroptera: why bats?
Gudrun Wibbelt et al.
BIOLOGY LETTERS (2010)
De novo assembly of human genomes with massively parallel short read sequencing
Ruiqiang Li et al.
GENOME RESEARCH (2010)
KEGGgraph: a graph approach to KEGG PATHWAY in R and bioconductor
Jitao David Zhang et al.
BIOINFORMATICS (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
Da Wei Huang et al.
NUCLEIC ACIDS RESEARCH (2009)
Phylogenetic and Functional Assessment of Orthologs Inference Projects and Methods
Adrian M. Altenhoff et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Correlates of substitution rate variation in mammalian protein-coding sequences
John J. Welch et al.
BMC EVOLUTIONARY BIOLOGY (2008)
Determination of mitochondrial genetic diversity in mammals
Benoit Nabholz et al.
GENETICS (2008)
Confirming the phylogeny of mammals by use of large comparative sequence data sets
Arjun B. Prasad et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Calculating bootstrap probabilities of phylogeny using multilocus sequence data
Tae-Kun Seo
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Pyrobayes:: an improved base caller for SNP discovery in pyrosequences
Aaron R. Quinlan et al.
NATURE METHODS (2008)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Using genomic data to unravel the root of the placental mammal phylogeny
William J. Murphy et al.
GENOME RESEARCH (2007)
RTP801 is a novel retinoic acid-responsive gene associated with myeloid differentiation
Sigal Gery et al.
EXPERIMENTAL HEMATOLOGY (2007)
RTP801 is elevated in Parkinson brain substantia nigral neurons and mediates death in cellular models of Parkinson's disease by a mechanism involving mammalian target of rapamycin inactivation
Cristina Malagelada et al.
JOURNAL OF NEUROSCIENCE (2006)
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
BIOINFORMATICS (2006)
Bats: Important reservoir hosts of emerging viruses
Charles H. Calisher et al.
CLINICAL MICROBIOLOGY REVIEWS (2006)
Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions
Hidenori Nishihara et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
A new method for estimating nonsynonymous substitutions and its applications to detecting positive selection
H Tang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Identification of clustered microRNAs using an ab initio prediction method -: art. no. 267
A Sewer et al.
BMC BIOINFORMATICS (2005)
Natural selection on protein-coding genes in the human genome
CD Bustamante et al.
NATURE (2005)
Blast2GO:: a universal tool for annotation, visualization and analysis in functional genomics research
A Conesa et al.
BIOINFORMATICS (2005)
OrfPredictor: predicting protein-coding regions in EST-derived sequences
XJ Min et al.
NUCLEIC ACIDS RESEARCH (2005)
A scan for positively selected genes in the genomes of humans and chimpanzees
R Nielsen et al.
PLOS BIOLOGY (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
The Gene Ontology Categorizer
Cliff A. Joslyn et al.
BIOINFORMATICS (2004)
Mammalian phylogenomics comes of age
WJ Murphy et al.
TRENDS IN GENETICS (2004)
Positive selection on the human genome
EJ Vallender et al.
HUMAN MOLECULAR GENETICS (2004)
RASCAL: rapid scanning and correction of multiple sequence alignments
JD Thompson et al.
BIOINFORMATICS (2003)
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
G Pertea et al.
BIOINFORMATICS (2003)
A uniform system for microRNA annotation
V Ambros et al.
RNA (2003)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Mutations within a furin consensus sequence block proteolytic release of ectodysplasin-A and cause X-linked hypohidrotic ectodermal dysplasia
YW Chen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Parallel adaptive radiations in two major clades of placental mammals
O Madsen et al.
NATURE (2001)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
