相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Proteolytic Activity Matrix Analysis (PrAMA) for simultaneous determination of multiple protease activities
Miles A. Miller et al.
INTEGRATIVE BIOLOGY (2011)
Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum
Sean C. Bendall et al.
SCIENCE (2011)
Crowdsourcing Network Inference: The DREAM Predictive Signaling Network Challenge
Robert J. Prill et al.
SCIENCE SIGNALING (2011)
Global Sensitivity Analysis for Systems with Independent and/or Correlated Inputs
Genyuan Li et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2010)
Networks Inferred from Biochemical Data Reveal Profound Differences in Toll-like Receptor and Inflammatory Signaling between Normal and Transformed Hepatocytes
Leonidas G. Alexopoulos et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Systems analysis of EGF receptor signaling dynamics with microwestern arrays
Mark F. Ciaccio et al.
NATURE METHODS (2010)
Dynamic Proteomics: a database for dynamics and localizations of endogenous fluorescently-tagged proteins in living human cells
Milana Frenkel-Morgenstern et al.
NUCLEIC ACIDS RESEARCH (2010)
Multiple Imputations Applied to the DREAM3 Phosphoproteomics Challenge: A Winning Strategy
Nicolas Guex et al.
PLOS ONE (2010)
Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges
Robert J. Prill et al.
PLOS ONE (2010)
DREAM4: Combining Genetic and Dynamic Information to Identify Biological Networks and Dynamical Models
Alex Greenfield et al.
PLOS ONE (2010)
Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction
Julio Saez-Rodriguez et al.
MOLECULAR SYSTEMS BIOLOGY (2009)
minet: A R/Bioconductor Package for Inferring Large Transcriptional Networks Using Mutual Information
Patrick E. Meyer et al.
BMC BIOINFORMATICS (2008)
Sparse inverse covariance estimation with the graphical lasso
Jerome Friedman et al.
BIOSTATISTICS (2008)
A primer on learning in Bayesian networks for computational biology
Chris J. Needham et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
Reconstructing biochemical pathways from time course data
Jeyaraman Srividhya et al.
PROTEOMICS (2007)
High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes
Noah Fahlgren et al.
PLOS ONE (2007)
Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles
Jeremiah J. Faith et al.
PLOS BIOLOGY (2007)
Modeling HER2 effects on cell behavior from mass Spectrometry phosphotyrosine data
Neil Kumar et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
Conservation of the metabolomic response to starvation across two divergent microbes
Matthew J. Brauer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Temporal dynamics of tyrosine phosphorylation in insulin signaling
Katrin Schmelzle et al.
DIABETES (2006)
ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context
AA Margolin et al.
BMC BIOINFORMATICS (2006)
Random sampling-high dimensional model representation (RS-HDMR) and orthogonality of its different order component functions
GY Li et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2006)
Least absolute regression network analysis of the murine osteoblast differentiation network
EP van Someren et al.
BIOINFORMATICS (2006)
Protein kinase C (PKC)-delta/-epsilon mediate the PKC/Akt-dependent phosphorylation of extracellular signal-regulated kinases 1 and 2 in MCF-7 cells stimulated by bradykinin
S Greco et al.
JOURNAL OF ENDOCRINOLOGY (2006)
High-throughput protein expression analysis using tissue microarray technology of a large well-characterised series identifies biologically distinct classes of breast cancer confirming recent cDNA expression analyses
DM Abd El-Rehim et al.
INTERNATIONAL JOURNAL OF CANCER (2005)
Causal protein-signaling networks derived from multiparameter single-cell data
K Sachs et al.
SCIENCE (2005)
Bayesian analysis of signaling networks governing embryonic stem cell fate decisions
PJ Woolf et al.
BIOINFORMATICS (2005)
Chemogenomic profiling on a genomewide scale using reverse-engineered gene networks
D di Bernardo et al.
NATURE BIOTECHNOLOGY (2005)
High-throughput metabolic flux analysis based on gas chromatography-mass spectrometry derived 13C constraints
E Fischer et al.
ANALYTICAL BIOCHEMISTRY (2004)
Optimizing genetic circuits by global sensitivity analysis
XJ Feng et al.
BIOPHYSICAL JOURNAL (2004)
Advances to Bayesian network inference for generating causal networks from observational biological data
J Yu et al.
BIOINFORMATICS (2004)
Modifying the Schwarz Bayesian information criterion to locate multiple interacting quantitative trait loci
M Bogdan et al.
GENETICS (2004)
Inferring genetic networks and identifying compound mode of action via expression profiling
TS Gardner et al.
SCIENCE (2003)
Random sampling-high dimensional model representation (RS-HDMR) with nonuniformly distributed variables: Application to an integrated multimedia/multipathway exposure and dose model for trichloroethylene
SW Wang et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2003)
Reverse engineering gene networks:: Integrating genetic perturbations with dynamical modeling
J Tegnér et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
High-dimensional model representations generated from low order Terms - 1p-RS-HDMR
GY Li et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2003)
Correlation method for variance reduction of Monte Carlo integration in RS-HDMR
GY Li et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2003)
ERKs are the point of divergence of PKA and PKC activation by PTHrP in human skin fibroblasts
V Fortino et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2002)
Cyclic AMP-dependent kinase regulates Raf-1 kinase mainly by phosphorylation of serine 259
AS Dhillon et al.
MOLECULAR AND CELLULAR BIOLOGY (2002)
High dimensional model representations
GY Li et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2001)
Efficient implementation of high dimensional model representations
OF Alis et al.
JOURNAL OF MATHEMATICAL CHEMISTRY (2001)
β2-adrenergic receptor-induced p38 MAPK activation is mediated by protein kinase A rather than by Gi or Gβγ in adult mouse cardiomyocytes
M Zheng et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Multiplexed particle-based flow cytometric assays
DAA Vignali
JOURNAL OF IMMUNOLOGICAL METHODS (2000)
Genetic network inference: from co-expression clustering to reverse engineering
P D'haeseleer et al.
BIOINFORMATICS (2000)
Akt/protein kinase B is regulated by autophosphorylation at the hypothetical PDK-2 site
A Toker et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
cAMP cascade leads to Ras activation in cortical neurons
A Ambrosini et al.
MOLECULAR BRAIN RESEARCH (2000)
Using Bayesian networks to analyze expression data
N Friedman et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2000)