相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。On the suitability of short reads of 16S rRNA for phylogeny-based analyses in environmental surveys
Patricio Jeraldo et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Complete Genome Sequence of a Beneficial Plant Root-Associated Bacterium, Pseudomonas brassicacearum
Philippe Ortet et al.
JOURNAL OF BACTERIOLOGY (2011)
A Long-Branch Attraction Artifact Reveals an Adaptive Radiation in Pseudomonas
Josselin Bodilis et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Diversity of 16S rRNA Genes within Individual Prokaryotic Genomes
Anna Y. Pei et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Both Cycloclasticus spp. and Pseudomonas spp. as PAH-degrading bacteria in the Seine estuary (France)
Maite Niepceron et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
Multilocus sequence analysis of the central clade of the genus Vibrio by using the 16S rRNA, recA, pyrH, rpoD, gyrB, rctB and toxR genes
Javier Pascual et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Intragenomic and intraspecific heterogeneity in rrs may surpass interspecific variability in a natural population of Veillonella
Anne-Laure Michon et al.
MICROBIOLOGY-SGM (2010)
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens
Mark W. Silby et al.
GENOME BIOLOGY (2009)
Global Sequencing: A Review of Current Molecular Data and New Methods Available to Assess Microbial Diversity
Richard Christen
MICROBES AND ENVIRONMENTS (2008)
A Rapid Bootstrap Algorithm for the RAxML Web Servers
Alexandros Stamatakis et al.
SYSTEMATIC BIOLOGY (2008)
Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing
Susan M. Huse et al.
PLOS GENETICS (2008)
Real-time PCR determination of rRNA gene copy number:: absolute and relative quantification assays with Escherichia coli
Changsoo Lee et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2008)
Intragenomic 16S rDNA divergence in Haloarcula marismortui is an adaptation to different temperatures
A. Lopez-Lopez et al.
JOURNAL OF MOLECULAR EVOLUTION (2007)
Persistence of rRNA operon mutated copies and rapid re-emergence of linezolid resistance in Staphylococcus aureus
Athanassios Tsakris et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2007)
Multilocus sequence analysis of biocontrol fluorescent Pseudomonas spp. producing the antifungal compound 2,4-diacetylphloroglucinol
Michele Frapolli et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Evolutionary rates vary among rRNA structural elements
S. Smit et al.
NUCLEIC ACIDS RESEARCH (2007)
Use of 16S rRNA and rpoB genes as molecular markers for microbial ecology studies
Rebecca J. Case et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Comparative genomics of host-specific virulence in Pseudomonas syringae
Sara F. Sarkar et al.
GENETICS (2006)
Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5
IT Paulsen et al.
NATURE BIOTECHNOLOGY (2005)
Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates
LA Tayeb et al.
RESEARCH IN MICROBIOLOGY (2005)
Polymorphism and gene conversion of the 16S rRNA genes in the multiple rRNA operons of Vibrio parahaemolyticus
N González-Escalona et al.
FEMS MICROBIOLOGY LETTERS (2005)
Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons
SG Acinas et al.
JOURNAL OF BACTERIOLOGY (2004)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Phylogenetic relationships between environmental and clinical isolates of Pseudomonas fluorescens and related species deduced from 16S rRNA gene and OprF protein sequences
J Bodilis et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2004)
Life history implications of rRNA gene copy number in Escherichia coli
BS Stevenson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Evaluation of the rrn operon copy number in Bifidobacterium using real-time PCR
M Candela et al.
LETTERS IN APPLIED MICROBIOLOGY (2004)
Phylogenetics and the cohesion of bacterial genomes
V Daubin et al.
SCIENCE (2003)
Rates and consequences of recombination between rRNA operons
JQ Hashimoto et al.
JOURNAL OF BACTERIOLOGY (2003)
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
KE Nelson et al.
ENVIRONMENTAL MICROBIOLOGY (2002)
Ribosomal RNA content in microcolony forming soil bacteria measured by quantitative 16S rRNA hybridization and image analysis
SJ Binnerup et al.
FEMS MICROBIOLOGY ECOLOGY (2001)
rrndb: the Ribosomal RNA Operon Copy Number Database
JA Klappenbach et al.
NUCLEIC ACIDS RESEARCH (2001)
Phylogeny of the genus Pseudomonas:: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes
S Yamamoto et al.
MICROBIOLOGY-SGM (2000)
Gene conversion drives within genic sequences: Concerted evolution of ribosomal RNA genes in bacteria and archaea
DQ Liao
JOURNAL OF MOLECULAR EVOLUTION (2000)
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
CK Stover et al.
NATURE (2000)
Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence
Y Anzai et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)
Sequence diversity of Pseudomonas aeruginosa:: Impact on population structure and genome evolution
C Kiewitz et al.
JOURNAL OF BACTERIOLOGY (2000)
分享论文
