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S. M. Collins et al.
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Masahira Hattori et al.
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Human Microbiome Project-paving the way to a better understanding of ourselves and our microbes
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Jane Peterson et al.
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Hydrogenoanaerobacterium saccharovorans gen. nov., sp nov., isolated from H2-producing UASB granules
Lei Song et al.
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Hatsumi Shiratori et al.
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Peter J. Turnbaugh et al.
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Martin Keller et al.
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Hwee Tong Tan et al.
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Harry Sokol et al.
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Flow cytometry for the rapid detection of bacteria in cell culture production medium
Irene O. L. McHugh et al.
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An ecological and evolutionary perspective on human-microbe mutualism and disease
Les Dethlefsen et al.
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Ramunas Stepanauskas et al.
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Targeted access to the genomes of low-abundance organisms in complex microbial communities
Mircea Podar et al.
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S. Macfarlane et al.
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Estelle Devillard et al.
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Ruth E. Ley et al.
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Gabriella Gentile et al.
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Monica Comalada et al.
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Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
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Ana Lucia Cordova-Kreylos et al.
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D Daffonchio et al.
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E Furrie
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Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis
K Ben-Amor et al.
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Colonic microbiota signatures across five northern European countries
C Lay et al.
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Diversity of the human intestinal microbial flora
PB Eckburg et al.
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Glycan foraging in vivo by an intestine-adapted bacterial symbiont
JL Sonnenburg et al.
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Restricted distribution of the butyrate kinase pathway among butyrate-producing bacteria from the human colon
P Louis et al.
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W Scheppach et al.
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Hespellia stercorisuis gen. nov., sp nov and Hespellia porcina sp nov., isolated from swine manure storage pits
TR Whitehead et al.
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Dysbiosis in inflammatory bowel disease
CP Tamboli et al.
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RC Gentleman et al.
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F Guarner et al.
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C Burtscher et al.
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Quantification of uncultured Ruminococcus obeum-like bacteria in human fecal samples by fluorescent in situ hybridization and flow cytometry using 16S rRNA-targeted probes
EG Zoetendal et al.
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HJM Harmsen et al.
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LA O'Sullivan et al.
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M Campieri et al.
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16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga- Flavobacterim-Bacteroides
R Weller et al.
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G Nebe-von-Caron et al.
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