相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea
Irene Wagner-Doebler et al.
ISME JOURNAL (2010)
Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization
Yan Zhang et al.
BMC GENOMICS (2009)
Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre
Rachel S. Poretsky et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea
Sarah M. Sowell et al.
ISME JOURNAL (2009)
Gene transfer agent (GTA) genes reveal diverse and dynamic Roseobacter and Rhodobacter populations in the Chesapeake Bay
Yanlin Zhao et al.
ISME JOURNAL (2009)
Carbohydrate Metabolism and Carbon Fixation in Roseobacter denitrificans OCh114
Kuo-Hsiang Tang et al.
PLOS ONE (2009)
Diversity, ecology, and genomics of the Roseobacter clade:: a short overview
Thorsten Brinkhoff et al.
ARCHIVES OF MICROBIOLOGY (2008)
Vitamin B-12 and cobalt cycling among diatoms and bacteria in Antarctic sea ice microbial communities
Gordon T. Taylor et al.
LIMNOLOGY AND OCEANOGRAPHY (2008)
Dealing with incongruence in phylogenomic analyses
Nicolas Galtier et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
Genome evolution in cyanobacteria: The stable core and the variable shell
Tuo Shi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
A Rapid Bootstrap Algorithm for the RAxML Web Servers
Alexandros Stamatakis et al.
SYSTEMATIC BIOLOGY (2008)
The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
Victor M. Markowitz et al.
NUCLEIC ACIDS RESEARCH (2008)
Distinct distribution pattern of abundance and diversity of aerobic anoxygenic phototrophic bacteria in the global ocean
Nianzhi Jiao et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Ecological genomics of marine roseobacters
M. A. Moran et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
The power of phylogenetic approaches to detect horizontally transferred genes
Maria S. Poptsova et al.
BMC EVOLUTIONARY BIOLOGY (2007)
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
Gerard Talavera et al.
SYSTEMATIC BIOLOGY (2007)
Phylogenetic analyses of cyanobacterial genomes: Quantification of horizontal gene transfer events
Olga Zhaxybayeva et al.
GENOME RESEARCH (2006)
Visualizing and assessing phylogenetic congruence of core gene sets:: A case study of the γ-proteobacteria
E Susko et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Phylogenetic identification of lateral genetic transfer events
RG Beiko et al.
BMC EVOLUTIONARY BIOLOGY (2006)
Highways of gene sharing in prokaryotes
RG Beiko et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Overview of the marine Roseobacter lineage
A Buchan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Ginkgo, a multivariate analysis package
G Bouxin
JOURNAL OF VEGETATION SCIENCE (2005)
Do orthologous gene phylogenies really support tree-thinking?
E Bapteste et al.
BMC EVOLUTIONARY BIOLOGY (2005)
ProtTest: selection of best-fit models of protein evolution
F Abascal et al.
BIOINFORMATICS (2005)
Clann: investigating phylogenetic information through supertree analyses
CJ Creevey et al.
BIOINFORMATICS (2005)
Studying plasmid horizontal transfer in situ: A critical review
SJ Sorensen et al.
NATURE REVIEWS MICROBIOLOGY (2005)
Mechanisms of, and barriers to, horizontal gene transfer between bacteria
CM Thomas et al.
NATURE REVIEWS MICROBIOLOGY (2005)
Horizontal gene transfer, genome innovation and evolution
JP Gogarten et al.
NATURE REVIEWS MICROBIOLOGY (2005)
The iProClass integrated database for protein functional analysis
CH Wu et al.
COMPUTATIONAL BIOLOGY AND CHEMISTRY (2004)
Dimethylsulfoniopropionate metabolism by Pfiesteria-associated Roseobacter spp.
TR Miller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Phylogeny of γ-proteobacteria:: resolution of one branch of the universal tree
JR Brown et al.
BIOESSAYS (2004)
From gene trees to organismal phylogeny in prokaryotes:: The case of the γ-proteobacteria
E Lerat et al.
PLOS BIOLOGY (2003)
Horizontal gene transfer accelerates genome innovation and evolution
R Jain et al.
MOLECULAR BIOLOGY AND EVOLUTION (2003)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
An improved probability mapping approach to assess genome mosaicism
O Zhaxybayeva et al.
BMC GENOMICS (2003)
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
L Li et al.
GENOME RESEARCH (2003)
Horizontal transfer of segments of the 16S rRNA genes between species of the Streptococcus anginosus group
LM Schouls et al.
JOURNAL OF BACTERIOLOGY (2003)
Prokaryotic evolution in light of gene transfer
JP Gogarten et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
A phylogenomic approach to bacterial phylogeny:: Evidence of a core of genes sharing a common history
V Daubin et al.
GENOME RESEARCH (2002)
Horizontal gene transfer and bacterial diversity
C Dutta et al.
JOURNAL OF BIOSCIENCES (2002)
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
HA Schmidt et al.
BIOINFORMATICS (2002)
CONSEL: for assessing the confidence of phylogenetic tree selection
H Shimodaira et al.
BIOINFORMATICS (2001)
MRBAYES: Bayesian inference of phylogenetic trees
JP Huelsenbeck et al.
BIOINFORMATICS (2001)
Contribution of aerobic photoheterotrophic bacteria to the carbon cycle in the ocean
ZS Kolber et al.
SCIENCE (2001)
Lateral gene transfer and the nature of bacterial innovation
H Ochman et al.
NATURE (2000)
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov et al.
NUCLEIC ACIDS RESEARCH (2000)