A consensus map of QTLs controlling the root length of maize

Traits related to the root length of maize (Zea mays L.), reported by 15 QTL studies of nine mapping populations, were subjected to a QTL meta-analysis. Traits were grouped according to ontology, and we propose a system of abbreviations to unambiguously identify the different root types and branching orders. The nine maps were merged into a consensus map, and the number and positions of putative QTL clusters (MQTLs) were determined. A total of 161 QTLs was grouped into 24 MQTLs and 16 individual QTLs. Seven MQTLs harbored root traits, which had been reported to be collocated with QTLs for grain yield or other drought-responsive traits in the field. The most consistent collocations were observed for the number and weight of the seminal roots (five loci). Based on our analysis at least six loci are good candidates for further evaluation (bins 1.07, 2.04, 2.08, 3.06, 6.05 and 7.04). For example, the MQTL in bin 2.04 harbored ten different single QTLs; the MQTLs in bins 1.07 and 3.06 combined 11 and 7 QTLs, respectively, that were detected in more than three populations. The presented database is a first step for a comprehensive overview of the genetic architecture of root system architecture and its ecophysiological function.