相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Type I restriction enzymes and their relatives
Wil A. M. Loenen et al.
NUCLEIC ACIDS RESEARCH (2014)
Type III restriction-modification enzymes: a historical perspective
Desirazu N. Rao et al.
NUCLEIC ACIDS RESEARCH (2014)
To be or not to be: regulation of restriction-modification systems and other toxin-antitoxin systems
Iwona Mruk et al.
NUCLEIC ACIDS RESEARCH (2014)
The other face of restriction: modification-dependent enzymes
Wil A. M. Loenen et al.
NUCLEIC ACIDS RESEARCH (2014)
Highlights of the DNA cutters: a short history of the restriction enzymes
Wil A. M. Loenen et al.
NUCLEIC ACIDS RESEARCH (2014)
Engineering nicking enzymes that preferentially nick 5-methylcytosine-modified DNA
Alice Gutjahr et al.
NUCLEIC ACIDS RESEARCH (2014)
TstI, a Type II restriction-modification protein with DNA recognition, cleavage and methylation functions in a single polypeptide
Rachel M. Smith et al.
NUCLEIC ACIDS RESEARCH (2014)
Structural insight into the specificity of the B3 DNA-binding domains provided by the co-crystal structure of the C-terminal fragment of BfiI restriction enzyme
Dmitrij Golovenko et al.
NUCLEIC ACIDS RESEARCH (2014)
A sequence-specific DNA glycosylase mediates restriction-modification in Pyrococcus abyssi
Ken-ichi Miyazono et al.
NATURE COMMUNICATIONS (2014)
TAL effectors: function, structure, engineering and applications
Amanda Nga-Sze Mak et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2013)
INNOVATION TALENs: a widely applicable technology for targeted genome editing
J. Keith Joung et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2013)
Organization of the BcgI restriction-modification protein for the transfer of one methyl group to DNA
Rachel M. Smith et al.
NUCLEIC ACIDS RESEARCH (2013)
Organization of the BcgI restriction-modification protein for the cleavage of eight phosphodiester bonds in DNA
Rachel M. Smith et al.
NUCLEIC ACIDS RESEARCH (2013)
Characterization of the 5-hydroxymethylcytosine-specific DNA restriction endonucleases
Janine G. Borgaro et al.
NUCLEIC ACIDS RESEARCH (2013)
A bistable hysteretic switch in an activator-repressor regulated restriction-modification system
Kristen Williams et al.
NUCLEIC ACIDS RESEARCH (2013)
Site- and strand-specific nicking of DNA by fusion proteins derived from MutH and I-SceI or TALE repeats
Lilia Gabsalilow et al.
NUCLEIC ACIDS RESEARCH (2013)
Increasing cleavage specificity and activity of restriction endonuclease KpnI
Kommireddy Vasu et al.
NUCLEIC ACIDS RESEARCH (2013)
The Role of the Methyltransferase Domain of Bifunctional Restriction Enzyme RM.BpuSI in Cleavage Activity
Arthur Sarrade-Loucheur et al.
PLOS ONE (2013)
TALE-Pvull Fusion Proteins - Novel Tools for Gene Targeting
Mert Yanik et al.
PLOS ONE (2013)
DNA cloning: A personal view after 40 years
Stanley N. Cohen
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Allosteric Regulation of DNA Cleavage and Sequence-Specificity through Run-On Oligomerization
Dmitry Lyumkis et al.
STRUCTURE (2013)
Advances in targeted genome editing
Pablo Perez-Pinera et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2012)
Structure and operation of the DNA-translocating type I DNA restriction enzymes
Christopher K. Kennaway et al.
GENES & DEVELOPMENT (2012)
Targeted gene addition to a predetermined site in the human genome using a ZFN-based nicking enzyme
Jianbin Wang et al.
GENOME RESEARCH (2012)
Precision genome engineering with programmable DNA-nicking enzymes
Eunji Kim et al.
GENOME RESEARCH (2012)
A novel zinc-finger nuclease platform with a sequence-specific cleavage module
Benno Schierling et al.
NUCLEIC ACIDS RESEARCH (2012)
Engineered zinc finger nickases induce homology-directed repair with reduced mutagenic effects
Cherie L. Ramirez et al.
NUCLEIC ACIDS RESEARCH (2012)
DNA looping by FokI: the impact of synapse geometry on loop topology at varied site orientations
David A. Rusling et al.
NUCLEIC ACIDS RESEARCH (2012)
The methylomes of six bacteria
Iain A. Murray et al.
NUCLEIC ACIDS RESEARCH (2012)
DNA looping by FokI: the impact of twisting and bending rigidity on protein-induced looping dynamics
Niels Laurens et al.
NUCLEIC ACIDS RESEARCH (2012)
Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily
Kamil Steczkiewicz et al.
NUCLEIC ACIDS RESEARCH (2012)
Crystal structure and mechanism of action of the N6-methyladenine-dependent type IIM restriction endonuclease R.DpnI
Wojciech Siwek et al.
NUCLEIC ACIDS RESEARCH (2012)
The Crystal Structure of TAL Effector PthXo1 Bound to Its DNA Target
Amanda Nga-Sze Mak et al.
SCIENCE (2012)
Structural Basis for Sequence-Specific Recognition of DNA by TAL Effectors
Dong Deng et al.
SCIENCE (2012)
Crystallization and preliminary crystallographic analysis of the type IIL restriction enzyme MmeI in complex with DNA
Scott J. Callahan et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2011)
The reaction mechanism of Fold excludes the possibility of targeting zinc finger nucleases to unique DNA sites
Stephen E. Halford et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2011)
Zinc-Finger Nucleases: A Panoramic View
Dana Carroll
CURRENT GENE THERAPY (2011)
Zinc-Finger Nuclease Based Genome Surgery: It's All About Specificity
Eva-Maria Haendel et al.
CURRENT GENE THERAPY (2011)
A TALE nuclease architecture for efficient genome editing
Jeffrey C. Miller et al.
NATURE BIOTECHNOLOGY (2011)
An unbiased genome-wide analysis of zinc-finger nuclease specificity
Richard Gabriel et al.
NATURE BIOTECHNOLOGY (2011)
Revealing off-target cleavage specificities of zinc-finger nucleases by in vitro selection
Vikram Pattanayak et al.
NATURE METHODS (2011)
Hpy188I-DNA pre- and post-cleavage complexes-snapshots of the GIY-YIG nuclease mediated catalysis
Monika Sokolowska et al.
NUCLEIC ACIDS RESEARCH (2011)
Natural and engineered nicking endonucleases-from cleavage mechanism to engineering of strand-specificity
Siu-Hong Chan et al.
NUCLEIC ACIDS RESEARCH (2011)
Identification of new homologs of PD-(D/E)XK nucleases by support vector machines trained on data derived from profile-profile alignments
Mindaugas Laganeckas et al.
NUCLEIC ACIDS RESEARCH (2011)
Concerted action at eight phosphodiester bonds by the BcgI restriction endonuclease
Jacqueline J. T. Marshall et al.
NUCLEIC ACIDS RESEARCH (2011)
Target site cleavage by the monomeric restriction enzyme BcnI requires translocation to a random DNA sequence and a switch in enzyme orientation
Giedrius Sasnauskas et al.
NUCLEIC ACIDS RESEARCH (2011)
Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI
Betty W. Shen et al.
NUCLEIC ACIDS RESEARCH (2011)
Comparative characterization of the PvuRts1I family of restriction enzymes and their application in mapping genomic 5-hydroxymethylcytosine
Hua Wang et al.
NUCLEIC ACIDS RESEARCH (2011)
Characterization of PvuRts1I endonuclease as a tool to investigate genomic 5-hydroxymethylcytosine
Aleksandra Szwagierczak et al.
NUCLEIC ACIDS RESEARCH (2011)
The Discovery of Zinc Fingers and Their Applications in Gene Regulation and Genome Manipulation
Aaron Klug
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)
Categoric prediction of metal ion mechanisms in the active sites of 17 select type II restriction endonucleases
Sonia Advani et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2010)
The Type IIB restriction endonucleases
Jacqueline J.T. Marshall et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2010)
Personal Reflections on the Origins and Emergence of Recombinant DNA Technology
Paul Berg et al.
GENETICS (2010)
Genome editing with engineered zinc finger nucleases
Fyodor D. Urnov et al.
NATURE REVIEWS GENETICS (2010)
One is enough: insights into the two-metal ion nuclease mechanism from global analysis and computational studies
Cynthia M. Dupureur
METALLOMICS (2010)
Engineering Nt.BtsCI and Nb.BtsCI nicking enzymes and applications in generating long overhangs
Priscilla Hiu-Mei Too et al.
NUCLEIC ACIDS RESEARCH (2010)
REBASE-a database for DNA restriction and modification: enzymes, genes and genomes
Richard J. Roberts et al.
NUCLEIC ACIDS RESEARCH (2010)
A novel mechanism for the scission of double-stranded DNA: BfiI cuts both 3'-5' and 5'-3' strands by rotating a single active site
Giedrius Sasnauskas et al.
NUCLEIC ACIDS RESEARCH (2010)
DNA synapsis through transient tetramerization triggers cleavage by Ecl18kI restriction enzyme
Mindaugas Zaremba et al.
NUCLEIC ACIDS RESEARCH (2010)
A unique family of Mrr-like modification-dependent restriction endonucleases
Yu Zheng et al.
NUCLEIC ACIDS RESEARCH (2010)
A putative mobile genetic element carrying a novel type IIF restriction-modification system (PluTI)
Feroz Khan et al.
NUCLEIC ACIDS RESEARCH (2010)
Cofactor Requirement of HpyAV Restriction Endonuclease
Siu-hong Chan et al.
PLOS ONE (2010)
Folding, DNA Recognition, and Function of GIY-YIG Endonucleases: Crystal Structures of R.Eco29kl
Amanda Nga-Sze Mak et al.
STRUCTURE (2010)
Unusual Target Site Disruption by the Rare-Cutting HNH Restriction Endonuclease Pacl
Betty W. Shen et al.
STRUCTURE (2010)
Functional Analysis of MmeI from Methanol Utilizer Methylophilus methylotrophus, a Subtype IIC Restriction-Modification Enzyme Related to Type I Enzymes
Joanna Nakonieczna et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Tracking of Single Quantum Dot Labeled EcoRV Sliding along DNA Manipulated by Double Optical Tweezers
Andreas Biebricher et al.
BIOPHYSICAL JOURNAL (2009)
On the Divalent Metal Ion Dependence of DNA Cleavage by Restriction Endonucleases of the EcoRI Family
Vera Pingoud et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Oligomeric Structure Diversity within the GIY-YIG Nuclease Family
Elena M. Ibryashkina et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Targeting individual subunits of the FokI restriction endonuclease to specific DNA strands
Kelly L. Sanders et al.
NUCLEIC ACIDS RESEARCH (2009)
Rational engineering of type II restriction endonuclease DNA binding and cleavage specificity
Richard D. Morgan et al.
NUCLEIC ACIDS RESEARCH (2009)
Crystal structure of the -Me type II restriction endonuclease Hpy99I with target DNA
Monika Sokolowska et al.
NUCLEIC ACIDS RESEARCH (2009)
Transcription regulation of restriction-modification system Esp1396I
Ekaterina Bogdanova et al.
NUCLEIC ACIDS RESEARCH (2009)
The MmeI family: type II restriction-modification enzymes that employ single-strand modification for host protection
Richard D. Morgan et al.
NUCLEIC ACIDS RESEARCH (2009)
Structural mechanisms for the 5′-CCWGG sequence recognition by the N- and C-terminal domains of EcoRII
Dmitrij Golovenko et al.
NUCLEIC ACIDS RESEARCH (2009)
Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors
Jens Boch et al.
SCIENCE (2009)
A Simple Cipher Governs DNA Recognition by TAL Effectors
Matthew J. Moscou et al.
SCIENCE (2009)
Substrate specificity of new methyl-directed DNA endonuclease GlaI
Galina V. Tarasova et al.
BMC MOLECULAR BIOLOGY (2008)
Structural Analysis of the Heterodimeric Type IIS Restriction Endonuclease R.BspD6I Acting as a Complex between a Monomeric Site-specific Nickase and a Catalytic Subunit
Galina S. Kachalova et al.
JOURNAL OF MOLECULAR BIOLOGY (2008)
MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection
Richard D. Morgan et al.
NUCLEIC ACIDS RESEARCH (2008)
Dynamics and consequences of DNA looping by the FokI restriction endonuclease
Lucy E. Catto et al.
NUCLEIC ACIDS RESEARCH (2008)
How PspGI, catalytic domain of EcoRII and Ecl18kI acquire specificities for different DNA targets
Gintautas Tamulaitis et al.
NUCLEIC ACIDS RESEARCH (2008)
Transcription regulation of the type II restriction-modification system AhdI
Ekaterina Bogdanova et al.
NUCLEIC ACIDS RESEARCH (2008)
Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses
Jerzy Orlowski et al.
NUCLEIC ACIDS RESEARCH (2008)
The Helicobacter pylori HpyAXII restrictionmodification system limits exogenous DNA uptake by targeting GTAC sites but shows asymmetric conservation of the DNA methyltransferase and restriction endonuclease components
Olivier Humbert et al.
NUCLEIC ACIDS RESEARCH (2008)
The Fidelity Index provides a systematic quantitation of star activity of DNA restriction endonucleases
Hua Wei et al.
NUCLEIC ACIDS RESEARCH (2008)
Sliding and jumping of single EcoRV restriction enzymes on non-cognate DNA
Isabelle Bonnet et al.
NUCLEIC ACIDS RESEARCH (2008)
Structures of the rare-cutting restriction endonuclease NotI reveal a unique metal binding fold involved in DNA binding
Abigail R. Lambert et al.
STRUCTURE (2008)
Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site
Katarzyna H. Kaminska et al.
BMC STRUCTURAL BIOLOGY (2008)
Tetrameric restriction enzymes: expansion to the GIY-YIG nuclease family
Giedrius Gasiunas et al.
NUCLEIC ACIDS RESEARCH (2008)
Custom-designed zinc finger nucleases: What is next?
J. Wu et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2007)
Direct visualization of the EcoRII-DNA triple synaptic complex by atomic force microscopy
Luda S. Shlyakhtenko et al.
BIOCHEMISTRY (2007)
The restriction endonuclease R.NmeDI from Neisseria meningitidis that recognizes a palindromic sequence and cuts the DNA on both sides of the recognition sequence
Agnieszka Kwiatek et al.
NUCLEIC ACIDS RESEARCH (2007)
Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily
Elena M. Ibryashkina et al.
BMC STRUCTURAL BIOLOGY (2007)
An EM view of the FokI synaptic complex by single particle analysis
Eva Scheuring Vanamee et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Discovery of natural nicking endonucleases Nb.BsrDI and Nb.BtsI and engineering of top-strand nicking variants from BsrDI and BtsI
Shuang-Yong Xu et al.
NUCLEIC ACIDS RESEARCH (2007)
Structure-based redesign of the dimerization interface reduces the toxicity of zinc-finger nucleases
Michal Szczepek et al.
NATURE BIOTECHNOLOGY (2007)
An improved zinc-finger nuclease architecture for highly specific genome editing
Jeffrey C. Miller et al.
NATURE BIOTECHNOLOGY (2007)
Mutability of an HNH nuclease imidazole general base and exchange of a deprotonation mechanism
Jennifer H. Eastberg et al.
BIOCHEMISTRY (2007)
Generation of DNA cleavage specificities of type II restriction endonucleases by reassortment of target recognition domains
Sonata Jurenaite-Urbanaviciene et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA
Monika Sokolowska et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
An EcoRI-RsrI chimeric restriction endonuclease retains parental sequence specificity
Tungalag Chuluunbaatar et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2007)
Topology of type II REases revisited;: structural classes and the common conserved core
Masha Y. Niv et al.
NUCLEIC ACIDS RESEARCH (2007)
R.KpnI, an HNH superfamily REase, exhibits differential discrimination at non-canonical sequences in the presence of Ca2+ and Mg2+
Matheshwaran Saravanan et al.
NUCLEIC ACIDS RESEARCH (2007)
Restriction endonucleases that bridge and excise two recognition sites from DNA
Jacqueline J. T. Marshall et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically
Magdalena Kaus-Drobek et al.
NUCLEIC ACIDS RESEARCH (2007)
Novel protein fold discovered in the PabI family of restriction enzymes
Ken-ichi Miyazono et al.
NUCLEIC ACIDS RESEARCH (2007)
A type IV modification dependent restriction nuclease that targets glucosylated hydroxymethyl cytosine modified DNAs
Catherine L. Bair et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Site-specific DNA transesterification catalyzed by a restriction enzyme
Giedrius Sasnauskas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Identification of a new subfamily of HNH nucleases and experimental characterization of a representative member, HphI restriction endonuclease
Iwona A. Cymerman et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2006)
Domain organization and metal ion requirement of the Type IIS restriction endonuclease MnlI
Edita Kriukiene
FEBS LETTERS (2006)
Positively charged C-terminal subdomains of EcoRV endonuclease: Contributions to DNA binding, bending, and cleavage
David A. Hiller et al.
BIOCHEMISTRY (2006)
Hyperthermophilic DNA methyltransferase M.Pabl from the archaeon Pyrococcus abyssi
Miki Watanabe et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Tension-dependent DNA cleavage by restriction endonucleases: Two-site enzymes are switched off at low force
Gregory J. Gemmen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Nickase and a protein encoded by an open reading frame downstream from the nickase BspD6I gene form a restriction endonuclease complex
A. K. Yunusova et al.
BIOCHEMISTRY-MOSCOW (2006)
Simultaneous binding of three recognition sites is necessary for a concerted plasmid DNA cleavage by EcoRII restriction endonuclease
G Tamulaitis et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Phylogenomic analysis of the GIY-YIG nuclease superfamily
Stanislaw Dunin-Horkawicz et al.
BMC GENOMICS (2006)
Biochemical and mutational analysis of EcoRII functional domains reveals evolutionary links between restriction enzymes
G Tamulaitis et al.
FEBS LETTERS (2006)
DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion
JR Horton et al.
NUCLEIC ACIDS RESEARCH (2006)
Protein assembly and DNA looping by the FokI restriction endonuclease
LE Catto et al.
NUCLEIC ACIDS RESEARCH (2006)
Mva1269I: A monomeric type IIS restriction endonuclease from micrococcus varians with two EcoRI- and FokI-like catalytic domains
E Armalyte et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
A view of consecutive binding events from structures of tetrameric endonuclease SfiI bound to DNA
ÉS Vanamee et al.
EMBO JOURNAL (2005)
Non-cognate Enzyme-DNA complex: Structural and kinetic analysis of EcoRV endonuclease bound to the EcoRl recognition site GAATTC
DA Hiller et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Measurement of the contributions of 1D and 3D pathways to the translocation of a protein along DNA
DM Gowers et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Structure of the metal-independent restriction enzyme Bfil reveals fusion of a specific DNA-binding domain with a nonspecific nuclease
S Grazulis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown function
J Kosinski et al.
BMC BIOINFORMATICS (2005)
Highly efficient endogenous human gene correction using designed zinc-finger nucleases
FD Urnov et al.
NATURE (2005)
Cleavage of individual DNA strands by the different subunits of the heterodimeric restriction endonuclease BbvCI
SRW Bellamy et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Site-specific DNA-nicking mutants of the heterodimeric restriction endonuclease R.BbvCI
DF Heiter et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Conversion of the tetrameric restriction endonuclease Bse634I into a dimer: Oligomeric structure-stability-function correlations
M Zaremba et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Type II restriction endonucleases: structure and mechanism
A Pingoud et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2005)
Crystal structures of type II restriction endonuclease Eco0109I and its complex with cognate DNA
H Hashimoto et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Specificity changes in the evolution of Type II restriction endonucleases -: A biochemical and bioinformatic analysis of restriction enzymes that recognize unrelated sequences
V Pingoud et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Homing endonuclease structure and function
BL Stoddard
QUARTERLY REVIEWS OF BIOPHYSICS (2005)
Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems
D Knowle et al.
JOURNAL OF BACTERIOLOGY (2005)
Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI
Z Yang et al.
NUCLEIC ACIDS RESEARCH (2005)
Discovery of a novel restriction endonuclease by genome comparison and application of a wheat-germ-based cell-free translation assay: Pabl (5 '-GTA/C) from the hyperthermophilic archaeon Pyrococcus abyssi
K Ishikawa et al.
NUCLEIC ACIDS RESEARCH (2005)
Zinc finger nucleases: custom-designed molecular scissors for genome engineering of plant and mammalian cells
S Durai et al.
NUCLEIC ACIDS RESEARCH (2005)
Generation of the BfiI restriction endonuclease from the fusion of a DNA recognition domain to a non-specific nuclease from the phospholipase D superfamily
M Zaremba et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
An asymmetric complex of restriction endonuclease Mspl on its palindromic DNA recognition site
CS Xu et al.
STRUCTURE (2004)
DNA cleavage by EcoRV endonuclease:: Two metal ions in three metal ion binding sites
NC Horton et al.
BIOCHEMISTRY (2004)
Type II restriction endonuclease R.KpnI is a member of the HNH nuclease superfamily
M Saravanan et al.
NUCLEIC ACIDS RESEARCH (2004)
One recognition sequence, seven restriction enzymes, five reaction mechanisms
DM Gowers et al.
NUCLEIC ACIDS RESEARCH (2004)
Mechanisms of coupling between DNA recognition specificity and catalysis in EcoRI endonuclease
MR Kurpiewski et al.
STRUCTURE (2004)
Simultaneous DNA binding and bending by EcoRV endonuclease observed by real-time fluorescence
DA Hiller et al.
BIOCHEMISTRY (2003)
Glucocorticoid receptor-like Zn(Cys)4 motifs in BslI restriction endonuclease
ÉS Vanamee et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
PspGI a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.:: Structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes
V Pingoud et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Purification and characterisation of a novel DNA methyltransferase, M.AhdI
P Marks et al.
NUCLEIC ACIDS RESEARCH (2003)
How the BfiI restriction enzyme uses one active site to cut two DNA strands
G Sasnauskas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes
RJ Roberts et al.
NUCLEIC ACIDS RESEARCH (2003)
The metal-independent type IIs restriction enzyme BfiI is a dimer that binds two DNA sites but has only one catalytic centre
A Lagunavicius et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Diversity of Type II restriction endonucleases that require two DNA recognition sites
M Mucke et al.
NUCLEIC ACIDS RESEARCH (2003)
How to get from A to B: strategies for analysing protein motion on DNA
SE Halford et al.
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (2002)
Evolutionary relationship between different subgroups of restriction endonucleases
V Pingoud et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
The type IIs restriction endonuclease BspMI is a tetramer that acts concertedly at two copies of an asymmetric DNA sequence
NA Gormley et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Self-generated DNA termini relax the specificity of SgrAl restriction endonuclease
J Bitinaite et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Characterization of Alol, a restriction-modification system of a new type
E Cesnaviciene et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Structure and function of type II restriction endonucleases
A Pingoud et al.
NUCLEIC ACIDS RESEARCH (2001)
The structural basis of damaged DNA recognition and endonucleolytic cleavage for very short patch repair endonuclease
SE Tsutakawa et al.
NUCLEIC ACIDS RESEARCH (2001)
DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sites
ML Embleton et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Hopping, jumping and looping by restriction enzymes
SE Halford
BIOCHEMICAL SOCIETY TRANSACTIONS (2001)
Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic level
NM Luscombe et al.
NUCLEIC ACIDS RESEARCH (2001)
The nicking endonuclease N.BstNBI is closely related to Type IIs restriction endonucleases MlyI and PleI
LS Higgins et al.
NUCLEIC ACIDS RESEARCH (2001)
Covalent joining of the subunits of a homodimeric type II restriction endonuclease:: Single-chain PvuII endonuclease
A Simoncsits et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
FokI requires two specific DNA sites for cleavage
ÉS Vanamee et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Identification of a PD-(D/E)XK-like domain with a novel configuration of the endonuclease active site in the methyl-directed restriction enzyme Mrr and its homologs
JM Bujnicki et al.
GENE (2001)
Polyphyletic evolution of type II restriction enzymes revisited: two independent sources of second-hand folds revealed
JM Bujnicki et al.
TRENDS IN BIOCHEMICAL SCIENCES (2001)
One- and three-dimensional pathways for proteins to reach specific DNA sites
NP Stanford et al.
EMBO JOURNAL (2000)
Characterization of the specific DNA nicking activity of restriction endonuclease N.BstNBI
RD Morgan et al.
BIOLOGICAL CHEMISTRY (2000)
Novel subtype of type IIs restriction enzymes -: BfiI endonuclease exhibits similarities to the EDTA-resistant nuclease Nuc of Salmonella typhimurium
R Sapranauskas et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA
M Deibert et al.
NATURE STRUCTURAL BIOLOGY (2000)
Atomic model of the 5-methylcytosine-specific restriction enzyme McrA reveals an atypical zinc finger and structural similarity to ββαMe endonucleases
JM Bujnicki et al.
MOLECULAR MICROBIOLOGY (2000)
Crystal structure of NaeI -: an evolutionary bridge between DNA endonuclease and topoisomerase
Q Huai et al.
EMBO JOURNAL (2000)
Structure of BamHI bound to nonspecific DNA: A model for DNA sliding
H Viadiu et al.
MOLECULAR CELL (2000)
On the possibilities and limitations of rational protein design to expand the specificity of restriction enzymes:: a case study employing EcoRV as the target
T Lanio et al.
PROTEIN ENGINEERING (2000)
分享论文
