相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Identification and characterisation of a G-quadruplex forming sequence in the promoter region of nuclear factor (erythroid-derived 2)-like 2 (Nrf2)
Zoe A. E. Waller et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2014)
Formation of a Stacked Dimeric G-Quadruplex Containing Bulges by the 5′-Terminal Region of Human Telomerase RNA (hTERC)
Herry Martadinata et al.
BIOCHEMISTRY (2014)
Association of G-quadruplex forming sequences with human mtDNA deletion breakpoints
Dawei W. Dong et al.
BMC GENOMICS (2014)
Targeting a c-MYC G-quadruplex DNA with a fragment library
Hamid R. Nasiri et al.
CHEMICAL COMMUNICATIONS (2014)
Validating Fragment-Based Drug Discovery for Biological RNAs: Lead Fragments Bind and Remodel the TPP Riboswitch Specifically
Katherine Deigan Warner et al.
CHEMISTRY & BIOLOGY (2014)
DNA Sequences Proximal to Human Mitochondrial DNA Deletion Breakpoints Prevalent in Human Disease Form G-quadruplexes, a Class of DNA Structures Inefficiently Unwound by the Mitochondrial Replicative Twinkle Helicase
Sanjay Kumar Bharti et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
Structure and Conformational Dynamics of a Stacked Dimeric G-Quadruplex Formed by the Human CEB1 Minisatellite
Michael Adrian et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2014)
The Major G-Quadruplex Formed in the Human BCL-2 Proximal Promoter Adopts a Parallel Structure with a 13-nt Loop in K+ Solution
Prashansa Agrawal et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2014)
Detection of G-quadruplex DNA in mammalian cells
Alexander Henderson et al.
NUCLEIC ACIDS RESEARCH (2014)
Tandem Repeats and G-Rich Sequences Are Enriched at Human CNV Breakpoints
Promita Bose et al.
PLOS ONE (2014)
Elevated Levels of G-Quadruplex Formation in Human Stomach and Liver Cancer Tissues
Giulia Biffi et al.
PLOS ONE (2014)
A Platinum(II) Phenylphenanthroimidazole with an Extended Side-Chain Exhibits Slow Dissociation from a c-Kit G-Quadruplex Motif
Katherine J. Castor et al.
CHEMISTRY-A EUROPEAN JOURNAL (2013)
Toward Improved Description of DNA Backbone: Revisiting Epsilon and Zeta Torsion Force Field Parameters
Marie Zgarbova et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2013)
An overview on molecular biology of KIT/PDGFRA wild type (WT) gastrointestinal stromal tumours (GIST)
Margherita Nannini et al.
JOURNAL OF MEDICAL GENETICS (2013)
Crystal Structure of a Promoter Sequence in the B-raf Gene Reveals an Intertwined Dimer Quadruplex
Dengguo Wei et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)
Relative Stability of Different DNA Guanine Quadruplex Stem Topologies Derived Using Large-Scale Quantum-Chemical Computations
Jiri Sponer et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)
G-Quadruplex Structures in the Human Genome as Novel Therapeutic Targets
Joanna Bidzinska et al.
MOLECULES (2013)
Quantitative visualization of DNA G-quadruplex structures in human cells
Giulia Biffi et al.
NATURE CHEMISTRY (2013)
Conformational dynamics of the human propeller telomeric DNA quadruplex on a microsecond time scale
Barira Islam et al.
NUCLEIC ACIDS RESEARCH (2013)
Structural Dynamics of Human Telomeric G-Quadruplex Loops Studied by Molecular Dynamics Simulations
Hong Zhu et al.
PLOS ONE (2013)
Synthesis and Evaluation of Quinazolone Derivatives as a New Class of c-KIT G-Quadruplex Binding Ligands
Xiaoxiao Wang et al.
ACS MEDICINAL CHEMISTRY LETTERS (2013)
A telomerase-associated RecQ protein-like helicase resolves telomeric G-quadruplex structures during replication
Jan Postberg et al.
GENE (2012)
Potential G-quadruplex formation at breakpoint regions of chromosomal translocations in cancer may explain their fragility
Vijeth K. Katapadi et al.
GENOMICS (2012)
Anticancer Activity and Cellular Repression of c-MYC by the G-Quadruplex-Stabilizing 11-Piperazinylquindoline Is Not Dependent on Direct Targeting of the G-Quadruplex in the c-MYC Promoter
Peda V. L. Boddupally et al.
JOURNAL OF MEDICINAL CHEMISTRY (2012)
Small-molecule-induced DNA damage identifies alternative DNA structures in human genes
Raphael Rodriguez et al.
NATURE CHEMICAL BIOLOGY (2012)
DNA secondary structures: stability and function of G-quadruplex structures
Matthew L. Bochman et al.
NATURE REVIEWS GENETICS (2012)
Computational detection and analysis of sequences with duplex-derived interstrand G-quadruplex forming potential
Kajia Cao et al.
METHODS (2012)
Molecular dynamics simulations of G-DNA and perspectives on the simulation of nucleic acid structures
Jiri Sponer et al.
METHODS (2012)
5′-UTR RNA G-quadruplexes: translation regulation and targeting
Anthony Bugaut et al.
NUCLEIC ACIDS RESEARCH (2012)
Crystal structure of a c-kit promoter quadruplex reveals the structural role of metal ions and water molecules in maintaining loop conformation
Dengguo Wei et al.
NUCLEIC ACIDS RESEARCH (2012)
An In Silico Study of the Differential Effect of Oxidation on Two Biologically Relevant G-Quadruplexes: Possible Implications in Oncogene Expression
William J. D. Stebbeds et al.
PLOS ONE (2012)
RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5′ End-Stacked Dimeric Parallel G-Quadruplexes
Vitaly Kuryavyi et al.
STRUCTURE (2012)
G-Quadruplex-Binding Benzo[a]phenoxazines Down-Regulate c-KIT Expression in Human Gastric Carcinoma Cells
Keith I. E. McLuckie et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Insight into G-DNA Structural Polymorphism and Folding from Sequence and Loop Connectivity through Free Energy Analysis
Xiaohui Cang et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Structure of Human Telomeric DNA in Crowded Solution
Brahim Heddi et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian et al.
NATURE REVIEWS DRUG DISCOVERY (2011)
Explaining the varied glycosidic conformational, G-tract length and sequence preferences for anti-parallel G-quadruplexes
Xiaohui Cang et al.
NUCLEIC ACIDS RESEARCH (2011)
The KRAS Promoter Responds to Myc-associated Zinc Finger and Poly(ADP-ribose) Polymerase 1 Proteins, Which Recognize a Critical Quadruplex-forming GA-element
Susanna Cogoi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter
Vitaly Kuryavyi et al.
NUCLEIC ACIDS RESEARCH (2010)
Targeting the c-Kit Promoter G-quadruplexes with 6-Substituted Indenoisoquinolines
Mallesham Bejugam et al.
ACS MEDICINAL CHEMISTRY LETTERS (2010)
A simple and fast algorithm for K-medoids clustering
Hae-Sang Park et al.
EXPERT SYSTEMS WITH APPLICATIONS (2009)
Targeting Human Gastrointestinal Stromal Tumor Cells with a Quadruplex-Binding Small Molecule
Mekala Gunaratnam et al.
JOURNAL OF MEDICINAL CHEMISTRY (2009)
A G-Rich Sequence within the c-kit Oncogene Promoter Forms a Parallel G-Quadruplex Having Asymmetric G-Tetrad Dynamics
Shang-Te Danny Hsu et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Structure of the Human Telomere in K+ Solution: A Stable Basket-Type G-Quadruplex with Only Two G-Tetrad Layers
Kah Wai Lim et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Arrangements of human telomere DNA quadruplex in physiologically relevant K+ solutions
D. Renciuk et al.
NUCLEIC ACIDS RESEARCH (2009)
GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
Berk Hess et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2008)
Conserved elements with potential to form polymorphic G-quadruplex structures in the first intron of human genes
Johanna Eddy et al.
NUCLEIC ACIDS RESEARCH (2008)
Trisubstituted isoalloxazines as a new class of G-quadruplex binding ligands: Small molecule regulation of c-kit oncogene expression
Mallesham Bejugam et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)
Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution
Anh Tuan Phan et al.
NUCLEIC ACIDS RESEARCH (2007)
Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter
Alan K. Todd et al.
NUCLEIC ACIDS RESEARCH (2007)
Phaser crystallographic software
Airlie J. McCoy et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)
Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution:: insights into structure polymorphism of the human telomeric sequence
Jixun Dai et al.
NUCLEIC ACIDS RESEARCH (2007)
Single-molecule conformational analysis of G-quadruplex formation in the promoter DNA duplex of the proto-oncogene C-kit
Pravin S. Shirude et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)
Refinenement of the AMBER force field for nucleic acids:: Improving the description of α/γ conformers
Alberto Perez et al.
BIOPHYSICAL JOURNAL (2007)
Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter
Anh Tuan Phan et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)
KIT mutations in GIST
Jonathan A. Fletcher et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2007)
G-quadruplexes in promoters throughout the human genome
Julian L. Huppert et al.
NUCLEIC ACIDS RESEARCH (2007)
Quadruplex DNA: sequence, topology and structure
Sarah Burge et al.
NUCLEIC ACIDS RESEARCH (2006)
Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution
Anh Tuan Phan et al.
NUCLEIC ACIDS RESEARCH (2006)
NMR solution structure of the major G-quadruplex structure formed in the human BCL2 promoter region
Jixun Dai et al.
NUCLEIC ACIDS RESEARCH (2006)
Structure of the human telomere in K+ solution:: An intramolecular (3+1) G-quadruplex scaffold
Kim Ngoc Luu et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)
A conserved quadruplex motif located in a transcription activation site of the human c-kit oncogene
Himesh Fernando et al.
BIOCHEMISTRY (2006)
Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution
Attila Ambrus et al.
NUCLEIC ACIDS RESEARCH (2006)
Putative DNA quadruplex formation within the human c-kit oncogene
S Rankin et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)
Highly prevalent putative quadruplex sequence motifs in human DNA
AK Todd et al.
NUCLEIC ACIDS RESEARCH (2005)
Prevalence of quadruplexes in the human genome
JL Huppert et al.
NUCLEIC ACIDS RESEARCH (2005)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Two-repeat human telomeric d(TAGGGTTAGGGT) sequence forms interconverting parallel and antiparallel G-quadruplexes in solution: Distinct topologies, thermodynamic properties, and folding/unfolding kinetics
AT Phan et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)
Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription
A Siddiqui-Jain et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Crystal structure of parallel quadruplexes from human telomeric DNA
GN Parkinson et al.
NATURE (2002)
分享论文
