4.8 Article

DNA double-strand-break complexity levels and their possible contributions to the probability for error-prone processing and repair pathway choice

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Biochemistry & Molecular Biology

Mechanisms of Programmed DNA Lesions and Genomic Instability in the Immune System

Frederick W. Alt et al.

Editorial Material Biochemistry & Molecular Biology

Early replication fragile sites: where replication-transcription collisions cause genetic instability

Oliver Mortusewicz et al.

EMBO JOURNAL (2013)

Article Multidisciplinary Sciences

Replication stress links structural and numerical cancer chromosomal instability

Rebecca A. Burrell et al.

NATURE (2013)

Review Biochemistry & Molecular Biology

Transcription-replication encounters, consequences and genomic instability

Anne Helmrich et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)

Article Biochemistry & Molecular Biology

Development of an assay to measure mutagenic non-homologous end-joining repair activity in mammalian cells

Ranjit S. Bindra et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemistry & Molecular Biology

DNA double-strand break repair within heterochromatic regions

Johanne M. Murray et al.

BIOCHEMICAL SOCIETY TRANSACTIONS (2012)

Article Biochemistry & Molecular Biology

Open and closed domains in the mouse genome are configured as 10-nm chromatin fibres

Eden Fussner et al.

EMBO REPORTS (2012)

Article Oncology

Inhibition of B-NHEJ in Plateau-Phase Cells Is Not a Direct Consequence of Suppressed Growth Factor Signaling

Satyendra K. Singh et al.

INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS (2012)

Editorial Material Biochemistry & Molecular Biology

Keeping It Together in Times of Stress: Checkpoint Function at Stalled Replication Forks

Theresa J. Berens et al.

MOLECULAR CELL (2012)

Review Biochemistry & Molecular Biology

Playing the End Game: DNA Double-Strand Break Repair Pathway Choice

J. Ross Chapman et al.

MOLECULAR CELL (2012)

Article Multidisciplinary Sciences

The genetic basis of early T-cell precursor acute lymphoblastic leukaemia

Jinghui Zhang et al.

NATURE (2012)

Article Multidisciplinary Sciences

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes

Jan J. Molenaar et al.

NATURE (2012)

Article Multidisciplinary Sciences

The accessible chromatin landscape of the human genome

Robert E. Thurman et al.

NATURE (2012)

Article Biochemical Research Methods

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

Maxim Imakaev et al.

NATURE METHODS (2012)

Article Biochemistry & Molecular Biology

A fractal model for nuclear organization: current evidence and biological implications

Aurelien Bancaud et al.

NUCLEIC ACIDS RESEARCH (2012)

Review Pharmacology & Pharmacy

Targeting DNA damage and repair: Embracing the pharmacological era for successful cancer therapy

K. Aziz et al.

PHARMACOLOGY & THERAPEUTICS (2012)

Article Multidisciplinary Sciences

Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1)

Cristian Boboila et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Dynamics of DNA Supercoils

M. T. J. van Loenhout et al.

SCIENCE (2012)

Review Oncology

Chromothripsis and cancer: causes and consequences of chromosome shattering

Josep V. Forment et al.

NATURE REVIEWS CANCER (2012)

Review Genetics & Heredity

Double-Strand Break End Resection and Repair Pathway Choice

Lorraine S. Symington et al.

ANNUAL REVIEW OF GENETICS, VOL 45 (2011)

Review Immunology

Mechanisms that Promote and Suppress Chromosomal Translocations in Lymphocytes

Monica Gostissa et al.

ANNUAL REVIEW OF IMMUNOLOGY, VOL 29 (2011)

Article Biochemistry & Molecular Biology

Massive Genomic Rearrangement Acquired in a Single Catastrophic Event during Cancer Development

Philip J. Stephens et al.

Article Biochemistry & Molecular Biology

The fractal globule as a model of chromatin architecture in the cell

Leonid A. Mirny

CHROMOSOME RESEARCH (2011)

Article Biochemistry & Molecular Biology

Factors determining DNA double-strand break repair pathway choice in G2 phase

Atsushi Shibata et al.

EMBO JOURNAL (2011)

Article Oncology

WIDESPREAD DEPENDENCE OF BACKUP NHEJ ON GROWTH STATE: RAMIFICATIONS FOR THE USE OF DNA-PK INHIBITORS

Satyendra K. Singh et al.

INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS (2011)

Article Biochemistry & Molecular Biology

Distinct Roles of Ape1 Protein in the Repair of DNA Damage Induced by Ionizing Radiation or Bleomycin

Hua Fung et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Review Biotechnology & Applied Microbiology

Variation in base excision repair capacity

David M. Wilson et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2011)

Review Biotechnology & Applied Microbiology

Chromatin dynamics during cell cycle mediate conversion of DNA damage into chromatid breaks and affect formation of chromosomal aberrations: Biological and clinical significance

Georgia I. Terzoudi et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2011)

Review Biotechnology & Applied Microbiology

Heavy charged particle radiobiology: Using enhanced biological effectiveness and improved beam focusing to advance cancer therapy

Christopher Allen et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2011)

Review Biotechnology & Applied Microbiology

Track structures, DNA targets and radiation effects in the biophysical Monte Carlo simulation code PARTRAC

Werner Friedland et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2011)

Review Biotechnology & Applied Microbiology

Clustered DNA lesion repair in eukaryotes: Relevance to mutagenesis and cell survival

Evelyne Sage et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2011)

Article Biotechnology & Applied Microbiology

Induction and repair of DNA double strand breaks: The increasing spectrum of non-homologous end joining pathways

Emil Mladenov et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2011)

Article Multidisciplinary Sciences

Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repair

Deniz Simsek et al.

NATURE (2011)

Article Biochemistry & Molecular Biology

Post-irradiation chemical processing of DNA damage generates double-strand breaks in cells already engaged in repair

Satyendra K. Singh et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Oncology

The role of homologous recombination in radiation-induced double-strand break repair

Penny A. Jeggo et al.

RADIOTHERAPY AND ONCOLOGY (2011)

Review Biochemistry & Molecular Biology

Tidying up loose ends: the role of polynucleotide kinase/phosphatase in DNA strand break repair

Michael Weinfeld et al.

TRENDS IN BIOCHEMICAL SCIENCES (2011)

Review Biochemistry & Molecular Biology

The Mechanism of Double-Strand DNA Break Repair by the Nonhomologous DNA End-Joining Pathway

Michael R. Lieber

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)

Review Genetics & Heredity

Regulation of Homologous Recombination in Eukaryotes

Wolf-Dietrich Heyer et al.

ANNUAL REVIEW OF GENETICS, VOL 44 (2010)

Article Biochemistry & Molecular Biology

High-resolution profiling of γH2AX around DNA double strand breaks in the mammalian genome

Jason S. Iacovoni et al.

EMBO JOURNAL (2010)

Article Multidisciplinary Sciences

Double Holliday junctions are intermediates of DNA break repair

Malgorzata Bzymek et al.

NATURE (2010)

Review Oncology

Charged particles in radiation oncology

Marco Durante et al.

NATURE REVIEWS CLINICAL ONCOLOGY (2010)

Editorial Material Biochemistry & Molecular Biology

NHEJ and its backup pathways in chromosomal translocations

Michael R. Lieber

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Characteristics of DNA-binding proteins determine the biological sensitivity to high-linear energy transfer radiation

Hongyan Wang et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

ATM and Artemis promote homologous recombination of radiation-induced DNA double-strand breaks in G2

Andrea Beucher et al.

EMBO JOURNAL (2009)

Review Multidisciplinary Sciences

The DNA-damage response in human biology and disease

Stephen P. Jackson et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

Role of Mre11 in chromosomal nonhomologous end joining in mammalian cells

Emilie Rass et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)

Review Oncology

Backup pathways of NHEJ in cells of higher eukaryotes: Cell cycle dependence

George Iliakis

RADIOTHERAPY AND ONCOLOGY (2009)

Article Multidisciplinary Sciences

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Erez Lieberman-Aiden et al.

SCIENCE (2009)

Review Biochemistry & Molecular Biology

Mechanism of eukaryotic homologous recombination

Joseph San Filippo et al.

ANNUAL REVIEW OF BIOCHEMISTRY (2008)

Review Cell Biology

The endless tale of non-homologous end-joining

Eric Weterings et al.

CELL RESEARCH (2008)

Article Biochemistry & Molecular Biology

Processing of DNA damage clusters in human cells: current status of knowledge

Alexandros G. Georgakilas

MOLECULAR BIOSYSTEMS (2008)

Article Biochemistry & Molecular Biology

DNA repair of clustered lesions in mammalian cells: involvement of non-homologous end-joining

Svitlana Malyarchuk et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemistry & Molecular Biology

Histone H1 functions as a stimulatory factor in backup pathways of NHEJ

Bustanur Rosidi et al.

NUCLEIC ACIDS RESEARCH (2008)

Review Biochemistry & Molecular Biology

gamma-H2AX in recognition and signaling of DNA double-strand breaks in the context of chromatin

Andrea Kinner et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Multidisciplinary Sciences

Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ

Mikhail Eltsov et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Activation of the cellular DNA damage response in the absence of DNA lesions

Evi Soutoglou et al.

SCIENCE (2008)

Review Oncology

Heavy ion carcinogenesis and human space exploration

Marco Durante et al.

NATURE REVIEWS CANCER (2008)

Review Cell Biology

Regulation of DNA double-strand break repair pathway choice

Meena Shrivastav et al.

CELL RESEARCH (2008)

Review Biochemistry & Molecular Biology

Non-homologous end-joining, a sticky affair

D. C. van Gent et al.

ONCOGENE (2007)

Review Cell Biology

Chromatin fiber structure: Where is the problem now?

Ken van Holde et al.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2007)

Article Oncology

Marked dependence on growth state of backup pathways of NHEJ

Frank Windhofer et al.

INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS (2007)

Article Biochemistry & Molecular Biology

PARP-1 and Ku compete for repair of DNA double strand breaks by distinct NHEJ pathways

Minli Wang et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Chemistry, Physical

Calculated DNA double-strand break and fragmentation yields after irradiation with He ions

W Friedland et al.

RADIATION PHYSICS AND CHEMISTRY (2005)

Article Cell Biology

Mechanisms of DNA double strand break repair and chromosome aberration formation

G Iliakis et al.

CYTOGENETIC AND GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

DNA double strand break repair and chromosomal translocation: Lessons from animal models

DO Ferguson et al.

ONCOGENE (2001)

Review Multidisciplinary Sciences

The DNA damage response: putting checkpoints in perspective

BBS Zhou et al.

NATURE (2000)

Article Multidisciplinary Sciences

Diverse karyotypic abnormalities of the c-myc locus associated with c-myc dysregulation and tumor progression in multiple myeloma

YP Shou et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Article Multidisciplinary Sciences

Clustered DNA damages induced in isolated DNA and in human cells by low doses of ionizing radiation

BM Sutherland et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Article Biology

Higher-order structure of interphase chromosomes and radiation-induced chromosomal exchange aberrations

JY Ostashevsky

INTERNATIONAL JOURNAL OF RADIATION BIOLOGY (2000)