期刊
NUCLEIC ACIDS RESEARCH
卷 41, 期 W1, 页码 W406-W411出版社
OXFORD UNIV PRESS
DOI: 10.1093/nar/gkt462
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资金
- Foundation for Polish Science MPD programme
- TEAM project [TEAM/2011-7/6]
- EU European Regional Development Fund [NN301071140]
- Polish Ministry of Science and Higher Education [IP2011 024371]
- Foundation for Polish Science
The CABS-fold web server provides tools for protein structure prediction from sequence only (de novo modeling) and also using alternative templates (consensus modeling). The web server is based on the CABS modeling procedures ranked in previous Critical Assessment of techniques for protein Structure Prediction competitions as one of the leading approaches for de novo and template-based modeling. Except for template data, fragmentary distance restraints can also be incorporated into the modeling process. The web server output is a coarse-grained trajectory of generated conformations, its Jmol representation and predicted models in all-atom resolution (together with accompanying analysis). CABS-fold can be freely accessed at http://biocomp.chem.uw.edu.pl/CABSfold.
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