期刊
NUCLEIC ACIDS RESEARCH
卷 41, 期 W1, 页码 W492-W498出版社
OXFORD UNIV PRESS
DOI: 10.1093/nar/gkt501
关键词
-
资金
- National Research Foundation of Korea
- Ministry of Science, ICT and Future Planning [2011-0009963, 2012-R1A2A4A01008475]
- CONACyT pre-doctoral scholarship
- Burroughs-Wellcome Foundation Career Award at the Scientific Interface
- National Institutes of Health [R01 GM102519]
- Seoul National University
To facilitate the analysis of large-scale high-throughput capillary electrophoresis data, we previously proposed a suite of efficient analysis software named HiTRACE (High Throughput Robust Analysis of Capillary Electrophoresis). HiTRACE has been used extensively for quantitating data from RNA and DNA structure mapping experiments, including mutate-and-map contact inference, chromatin footprinting, the Eterna RNA design project and other high-throughput applications. However, HiTRACE is based on a suite of command-line MATLAB scripts that requires nontrivial efforts to learn, use and extend. Here, we present HiTRACE-Web, an online version of HiTRACE that includes standard features previously available in the command-line version and additional features such as automated band annotation and flexible adjustment of annotations, all via a user-friendly environment. By making use of parallelization, the on-line workflow is also faster than software implementations available to most users on their local computers. Free access: http://hitrace.org.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据