4.8 Article

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

期刊

NUCLEIC ACIDS RESEARCH
卷 40, 期 D1, 页码 D571-D579

出版社

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkr1100

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资金

  1. JGI
  2. Office of Science, Office of Biological and Environmental Research, Life Sciences Division, US Department of Energy [DE-AC02-05CH11231]
  3. National Energy Research Scientific Computing Center, Office of Science of the US Department of Energy [DE-AC02-05CH11231]
  4. US National Institutes of Health Data Analysis and Coordination Center [U01-HG004866]
  5. University of California
  6. NATIONAL HUMAN GENOME RESEARCH INSTITUTE [U01HG004866] Funding Source: NIH RePORTER

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The Genomes OnLine Database (GOLD, http://www.genomesonline.org/) is a comprehensive resource for centralized monitoring of genome andmetagenome projects worldwide. Both complete and ongoing projects, along with their associated metadata, can be accessed in GOLD through precomputed tables and a search page. As of September 2011, GOLD, now on version 4.0, contains information for 11 472 sequencing projects, of which 2907 have been completed and their sequence data has been deposited in a public repository. Out of these complete projects, 1918 are finished and 989 are permanent drafts. Moreover, GOLD contains information for 340 metagenome studies associated with 1927 metagenome samples. GOLD continues to expand, moving toward the goal of providing the most comprehensive repository of metadata information related to the projects and their organisms/environments in accordance with the Minimum Information about any (x) Sequence specification and beyond.

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