相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Identification of DNA-binding Proteins Using Structural, Electrostatic and Evolutionary Features
Guy Nimrod et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures
Ofir Goldenberg et al.
NUCLEIC ACIDS RESEARCH (2009)
Recent developments in the MAFFT multiple sequence alignment program
Kazutaka Katoh et al.
BRIEFINGS IN BIOINFORMATICS (2008)
An improved general amino acid replacement matrix
Si Quang Le et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis
Ari Loytynoja et al.
SCIENCE (2008)
Detection of Functionally Important Regions in Hypothetical Proteins of Known Structure
Guy Nimrod et al.
STRUCTURE (2008)
The Universal Protein Resource (UniProt)
Amos Bairoch et al.
NUCLEIC ACIDS RESEARCH (2008)
UniRef: comprehensive and non-redundant UniProt reference clusters
Baris E. Suzek et al.
BIOINFORMATICS (2007)
The accuracy of several multiple sequence alignment programs for proteins
Paulo A. S. Nuin et al.
BMC BIOINFORMATICS (2006)
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
BIOINFORMATICS (2006)
Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-coffee
Fabrice Armougom et al.
NUCLEIC ACIDS RESEARCH (2006)
Protein database searches using compositionally adjusted substitution matrices
SF Altschul et al.
FEBS JOURNAL (2005)
ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
M Landau et al.
NUCLEIC ACIDS RESEARCH (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Comparison of site-specific rate-inference methods for protein sequences: Empirical Bayesian methods are superior
I Mayrose et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
ConSeq: the identification of functionally and structurally important residues in protein sequences
C Berezin et al.
BIOINFORMATICS (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
ConSurf: Identification of Functional Regions in Proteins by Surface-Mapping of Phylogenetic Information
F Glaser et al.
BIOINFORMATICS (2003)
The bioperl toolkit:: Perl modules for the life sciences
JE Stajich et al.
GENOME RESEARCH (2002)
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
S Whelan et al.
MOLECULAR BIOLOGY AND EVOLUTION (2001)
Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA
J Adachi et al.
JOURNAL OF MOLECULAR EVOLUTION (2000)
The Protein Data Bank
HM Berman et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
