期刊
NUCLEIC ACIDS RESEARCH
卷 39, 期 -, 页码 D1118-D1122出版社
OXFORD UNIV PRESS
DOI: 10.1093/nar/gkq1120
关键词
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资金
- National Science Foundation [MCB-0418891]
- National Institutes of Health [5 T32 CA106196-05]
- Ohio State University
- NATIONAL CANCER INSTITUTE [T32CA106196] Funding Source: NIH RePORTER
The Arabidopsis Gene Regulatory Information Server (AGRIS; http://arabidopsis.med.ohio-state.edu/) provides a comprehensive resource for gene regulatory studies in the model plant Arabidopsis thaliana. Three interlinked databases, AtTFDB, AtcisDB and AtRegNet, furnish comprehensive and updated information on transcription factors (TFs), predicted and experimentally verified cis-regulatory elements (CREs) and their interactions, respectively. In addition to significant contributions in the identification of the entire set of TF-DNA interactions, which are the key to understand the gene regulatory networks that govern Arabidopsis gene expression, tools recently incorporated into AGRIS include the complete set of words length 5-15 present in the Arabidopsis genome and the integration of AtRegNet with visualization tools, such as the recently developed ReIN application. All the information in AGRIS is publicly available and downloadable upon registration.
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