4.8 Article

PROMISCUOUS: a database for network-based drug-repositioning

期刊

NUCLEIC ACIDS RESEARCH
卷 39, 期 -, 页码 D1060-D1066

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OXFORD UNIV PRESS
DOI: 10.1093/nar/gkq1037

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  1. International Research Training Group on Genomics and Systems Biology of Molecular Networks [GRK1360]
  2. German Federal Ministry of Education and Research (MedSys)
  3. European Commission (SynSys)
  4. Deutsche Forschungsgemeinschaft [SFB 449]

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The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, the knowledge, understanding and prediction of so-called off-target effects allow a rational approach to the understanding of side-effects. With PROMISCUOUS we provide an exhaustive set of drugs (25 000), including withdrawn or experimental drugs, annotated with drug-protein and protein-protein relationships (21 500/104 000) compiled from public resources via text and data mining including manual curation. Measures of structural similarity for drugs as well as known side-effects can be easily connected to protein-protein interactions to establish and analyse networks responsible for multi-pharmacology. This network-based approach can provide a starting point for drug-repositioning. PROMISCUOUS is publicly available at http://bioinformatics.charite.de/promiscuous.

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