期刊
NUCLEIC ACIDS RESEARCH
卷 38, 期 -, 页码 D453-D456出版社
OXFORD UNIV PRESS
DOI: 10.1093/nar/gkp801
关键词
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资金
- National Basic Research Program of China [2005CB121000]
- Program for Changjiang Scholars and innovative Research Team in University of China [IRT0750]
- Programme of Introducing Talents of Discipline to Universities [B07045]
- National Natural Science Foundation of China [30800804]
- National Hi-Tech Research and Development Program of China [2006AA10A118]
The SilkDB is an open-access database for genome biology of the silkworm (Bombyx mori). Since the draft sequence was completed and the SilkDB was first released 5 years ago, we have collaborated with other groups to make much remarkable progress on silkworm genome research, such as the completion of a new high-quality assembly of the silkworm genome sequence as well as the construction of a genome-wide microarray to survey gene expression profiles. To accommodate these new genomic data and house more comprehensive genomic information, we have reconstructed SilkDB database with new web interfaces. In the new version (v2.0) of SilkDB, we updated the genomic data, including genome assembly, gene annotation, chromosomal mapping, orthologous relationship and experiment data, such as microarray expression data, Expressed Sequence Tags (ESTs) and corresponding references. Several new tools, including SilkMap, Silkworm Chromosome Browser (SCB) and BmArray, are developed to access silkworm genomic data conveniently. SilkDB is publicly available at the new URL of http://www.silkdb.org.
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