期刊
NUCLEIC ACIDS RESEARCH
卷 38, 期 -, 页码 D613-D619出版社
OXFORD UNIV PRESS
DOI: 10.1093/nar/gkp939
关键词
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资金
- National Human Genome Research Institute [5P41HG002371-09, 5U41HG004568-02, 1U54HG004555-01]
- Howard Hughes Medical Institute
- National Institute of Diabetes and Kidney Diseases, National Institutes of Health [2 R01 DK065806-06]
- NATIONAL HUMAN GENOME RESEARCH INSTITUTE [U54HG004555, U41HG004568, P41HG002371] Funding Source: NIH RePORTER
- NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES [R01DK065806] Funding Source: NIH RePORTER
The University of California, Santa Cruz (UCSC) Genome Browser website (http://genome.ucsc.edu/) provides a large database of publicly available sequence and annotation data along with an integrated tool set for examining and comparing the genomes of organisms, aligning sequence to genomes, and displaying and sharing users' own annotation data. As of September 2009, genomic sequence and a basic set of annotation 'tracks' are provided for 47 organisms, including 14 mammals, 10 non-mammal vertebrates, 3 invertebrate deuterostomes, 13 insects, 6 worms and a yeast. New data highlights this year include an updated human genome browser, a 44-species multiple sequence alignment track, improved variation and phenotype tracks and 16 new genome-wide ENCODE tracks. New features include dragand-zoom navigation, a Wiki track for user-added annotations, new custom track formats for large datasets (bigBed and bigWig), a new multiple alignment output tool, links to variation and protein structure tools, in silico PCR utility enhancements, and improved track configuration tools.
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