4.8 Article

RSAT:: regulatory sequence analysis tools

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

oPOSSUM: integrated tools for analysis of regulatory motif over-representation

Shannan J. Ho Sui et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

MEME: discovering and analyzing DNA and protein sequence motifs

Timothy L. Bailey et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemistry & Molecular Biology

Taverna: a tool for building and running workflows of services

Duncan Hull et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemistry & Molecular Biology

TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis

S Aerts et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes

SJH Sui et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

Detection of functional DNA motifs via statistical over-representation

MC Frith et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemical Research Methods

Taverna: a tool for the composition and enactment of bioinformatics workflows

T Oinn et al.

BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

Regulatory Sequence Analysis Tools

J van Helden

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemistry & Molecular Biology

Cluster-Buster: finding dense clusters of motifs in DNA sequences

MC Frith et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Biochemistry & Molecular Biology

Toucan:: deciphering the cis-regulatory logic of coregulated genes

S Aerts et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Multidisciplinary Sciences

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome

BP Berman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Biochemistry & Molecular Biology

REPuter: the manifold applications of repeat analysis on a genomic scale

S Kurtz et al.

NUCLEIC ACIDS RESEARCH (2001)

Article Biochemistry & Molecular Biology

Discovering regulatory elements in non-coding sequences by analysis of spaced dyads

Jacques van Heiden et al.

NUCLEIC ACIDS RESEARCH (2000)