相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Evolutionary Accessibility of Modular Fitness Landscapes
B. Schmiegelt et al.
JOURNAL OF STATISTICAL PHYSICS (2014)
Mapping the Fitness Landscape of Gene Expression Uncovers the Cause of Antagonism and Sign Epistasis between Adaptive Mutations
Hsin-Hung Chou et al.
PLOS GENETICS (2014)
Predicting C4 Photosynthesis Evolution: Modular, Individually Adaptive Steps on a Mount Fuji Fitness Landscape
David Heckmann et al.
CELL (2013)
Should evolutionary geneticists worry about higher-order epistasis?
Daniel M. Weinreich et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2013)
SELECTION BIASES THE PREVALENCE AND TYPE OF EPISTASIS ALONG ADAPTIVE TRAJECTORIES
Jeremy A. Draghi et al.
EVOLUTION (2013)
Translating HIV Sequences into Quantitative Fitness Landscapes Predicts Viral Vulnerabilities for Rational Immunogen Design
Andrew L. Ferguson et al.
IMMUNITY (2013)
Long-term evolution is surprisingly predictable in lattice proteins
Michael E. Palmer et al.
JOURNAL OF THE ROYAL SOCIETY INTERFACE (2013)
The peaks and geometry of fitness landscapes
Kristina Crona et al.
JOURNAL OF THEORETICAL BIOLOGY (2013)
Exact results for amplitude spectra of fitness landscapes
Johannes Neidhart et al.
JOURNAL OF THEORETICAL BIOLOGY (2013)
Patterns of Epistasis between Beneficial Mutations in an Antibiotic Resistance Gene
Martijn F. Schenk et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations
Gregory I. Lang et al.
NATURE (2013)
Genotype to phenotype: lessons from model organisms for human genetics
Ben Lehner
NATURE REVIEWS GENETICS (2013)
Evolutionary biochemistry: revealing the historical and physical causes of protein properties
Michael J. Harms et al.
NATURE REVIEWS GENETICS (2013)
Understanding, predicting and manipulating the genotypic evolution of antibiotic resistance
Adam C. Palmer et al.
NATURE REVIEWS GENETICS (2013)
Genome dynamics during experimental evolution
Jeffrey E. Barrick et al.
NATURE REVIEWS GENETICS (2013)
Designing Antibiotic Cycling Strategies by Determining and Understanding Local Adaptive Landscapes
Christiane P. Goulart et al.
PLOS ONE (2013)
Genotype to Phenotype Mapping and the Fitness Landscape of the E. coli lac Promoter
Jakub Otwinowski et al.
PLOS ONE (2013)
Predictability of evolution depends nonmonotonically on population size
Ivan G. Szendro et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Comprehensive experimental fitness landscape and evolutionary network for small RNA
Jose I. Jimenez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Environmental Dependence of Genetic Constraint
Marjon G. J. de Vos et al.
PLOS GENETICS (2013)
Stability-mediated epistasis constrains the evolution of an influenza protein
Lizhi Ian Gong et al.
ELIFE (2013)
A Comparison of Genotype-Phenotype Maps for RNA and Proteins
Evandro Ferrada et al.
BIOPHYSICAL JOURNAL (2012)
Real time forecasting of near-future evolution
Philip J. Gerrish et al.
JOURNAL OF THE ROYAL SOCIETY INTERFACE (2012)
Genomic analysis of a key innovation in an experimental Escherichia coli population
Zachary D. Blount et al.
NATURE (2012)
The Consistency of Beneficial Fitness Effects of Mutations across Diverse Genetic Backgrounds
Victoria M. Pearson et al.
PLOS ONE (2012)
The Molecular Diversity of Adaptive Convergence
Olivier Tenaillon et al.
SCIENCE (2012)
The Potential for Respiratory Droplet-Transmissible A/H5N1 Influenza Virus to Evolve in a Mammalian Host
Colin A. Russell et al.
SCIENCE (2012)
Exploring the Complexity of the HIV-1 Fitness Landscape
Roger D. Kouyos et al.
PLOS GENETICS (2012)
Replaying the Tape of Life: Quantification of the Predictability of Evolution
Alexander E. Lobkovsky et al.
Frontiers in Genetics (2012)
EVOLUTIONARY ADVANTAGE OF SMALL POPULATIONS ON COMPLEX FITNESS LANDSCAPES
Kavita Jain et al.
EVOLUTION (2011)
Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes
Frank J. Poelwijk et al.
JOURNAL OF THEORETICAL BIOLOGY (2011)
A systems analysis of mutational effects in HIV-1 protease and reverse transcriptase
Trevor Hinkley et al.
NATURE GENETICS (2011)
The pleiotropic structure of the genotype-phenotype map: the evolvability of complex organisms
Guenter P. Wagner et al.
NATURE REVIEWS GENETICS (2011)
Systems-biology approaches for predicting genomic evolution
Balazs Papp et al.
NATURE REVIEWS GENETICS (2011)
Hidden Randomness between Fitness Landscapes Limits Reverse Evolution
Longzhi Tan et al.
PHYSICAL REVIEW LETTERS (2011)
Experimental illumination of a fitness landscape
Ryan T. Hietpas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
A biophysical protein folding model accounts for most mutational fitness effects in viruses
C. Scott Wylie et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
The causes of epistasis
J. Arjan G. M. de Visser et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)
Statistical genetics and evolution of quantitative traits
Richard A. Neher et al.
REVIEWS OF MODERN PHYSICS (2011)
Negative Epistasis Between Beneficial Mutations in an Evolving Bacterial Population
Aisha I. Khan et al.
SCIENCE (2011)
Diminishing Returns Epistasis Among Beneficial Mutations Decelerates Adaptation
Hsin-Hung Chou et al.
SCIENCE (2011)
Second-Order Selection for Evolvability in a Large Escherichia coli Population
Robert J. Woods et al.
SCIENCE (2011)
Epistasis in a Model of Molecular Signal Transduction
Alain Pumir et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Evolutionary Accessibility of Mutational Pathways
Jasper Franke et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Predictability of Evolutionary Trajectories in Fitness Landscapes
Alexander E. Lobkovsky et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Nonlinear Fitness Landscape of a Molecular Pathway
Lilia Perfeito et al.
PLOS GENETICS (2011)
Epistasis between Beneficial Mutations and the Phenotype-to-Fitness Map for a ssDNA Virus
Darin R. Rokyta et al.
PLOS GENETICS (2011)
Initial Mutations Direct Alternative Pathways of Protein Evolution
Merijn L. M. Salverda et al.
PLOS GENETICS (2011)
Fitness Epistasis and Constraints on Adaptation in a Human Immunodeficiency Virus Type 1 Protein Region
Jack da Silva et al.
GENETICS (2010)
Fitness Epistasis among 6 Biosynthetic Loci in the Budding Yeast Saccharomyces cerevisiae
David W. Hall et al.
JOURNAL OF HEREDITY (2010)
Analysis of a complete DNA-protein affinity landscape
William Rowe et al.
JOURNAL OF THE ROYAL SOCIETY INTERFACE (2010)
Compensatory Mutations Restore Fitness during the Evolution of Dihydrofolate Reductase
Kyle M. Brown et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence
Justin B. Kinney et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Rapid Construction of Empirical RNA Fitness Landscapes
Jason N. Pitt et al.
SCIENCE (2010)
Evolutionary Trajectories of Beta-Lactamase CTX-M-1 Cluster Enzymes: Predicting Antibiotic Resistance
Angela Novais et al.
PLOS PATHOGENS (2010)
Exploring the Effect of Sex on Empirical Fitness Landscapes
J. Arjan G. M. de Visser et al.
AMERICAN NATURALIST (2009)
Probing Evolutionary Repeatability: Neutral and Double Changes and the Predictability of Evolutionary Adaptation
Scott William Roy
PLOS ONE (2009)
Emergence of species in evolutionary simulated annealing''
Muyoung Heo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Stepwise acquisition of pyrimethamine resistance in the malaria parasite
Elena R. Lozovsky et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
The rate at which asexual populations cross fitness valleys
Daniel B. Weissman et al.
THEORETICAL POPULATION BIOLOGY (2009)
Quantitative exploration of the catalytic landscape separating divergent plant sesquiterpene synthases
Paul E. O'Maille et al.
NATURE CHEMICAL BIOLOGY (2008)
OPINION Neutralism and selectionism: a network-based reconciliation
Andreas Wagner
NATURE REVIEWS GENETICS (2008)
Epistasis - the essential role of gene interactions in the structure and evolution of genetic systems
Patrick C. Phillips
NATURE REVIEWS GENETICS (2008)
Heterogeneous Adaptive Trajectories of Small Populations on Complex Fitness Landscapes
Daniel E. Rozen et al.
PLOS ONE (2008)
Energy-dependent fitness:: A quantitative model for the evolution of yeast transcription factor binding sites
Ville Mustonen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Epistasis between deleterious mutations and the evolution of recombination
Roger D. Kouyos et al.
TRENDS IN ECOLOGY & EVOLUTION (2007)
Distributions of epistasis in microbes fit predictions from a fitness landscape model
Guillaume Martin et al.
NATURE GENETICS (2007)
Tests of parallel molecular evolution in a long-term experiment with Escherichia coli
Robert Woods et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Prediction of RNA secondary structures: from theory to models and real molecules
Peter Schuster
REPORTS ON PROGRESS IN PHYSICS (2006)
Evolution of hormone-receptor complexity by molecular exploitation
JT Bridgham et al.
SCIENCE (2006)
Darwinian evolution can follow only very few mutational paths to fitter proteins
DM Weinreich et al.
SCIENCE (2006)
Microbial experiments on adaptive landscapes
N Colegrave et al.
BIOESSAYS (2005)
The biochemical architecture of an ancient adaptive landscape
M Lunzer et al.
SCIENCE (2005)
The genetic theory of adaptation: A brief history
HA Orr
NATURE REVIEWS GENETICS (2005)
Missense meanderings in sequence space: A biophysical view of protein evolution
MA DePristo et al.
NATURE REVIEWS GENETICS (2005)
Stochastic tunnels in evolutionary dynamics
Y Iwasa et al.
GENETICS (2004)
Predicting evolution by in vitro evolution requires determining evolutionary pathways
BG Hall
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2002)
Multidimensional epistasis and the disadvantage of sex
FA Kondrashov et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
A cross-section of the fitness landscape of dihydrofolate reductase
T Aita et al.
PROTEIN ENGINEERING (2001)
Interaction between directional epistasis and average mutational effects
CO Wilke et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2001)
Modeling genetic architecture: A multilinear theory of gene interaction
TF Hansen et al.
THEORETICAL POPULATION BIOLOGY (2001)
分享论文
