相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Comparative RNA sequencing reveals substantial genetic variation in endangered primates
George H. Perry et al.
GENOME RESEARCH (2012)
Changes in exon-intron structure during vertebrate evolution affect the splicing pattern of exons
Sahar Gelfman et al.
GENOME RESEARCH (2012)
DNase I sensitivity QTLs are a major determinant of human expression variation
Jacob F. Degner et al.
NATURE (2012)
Insights into hominid evolution from the gorilla genome sequence
Aylwyn Scally et al.
NATURE (2012)
Tempo and Mode in Evolution of Transcriptional Regulation
Kacy L. Gordon et al.
PLOS GENETICS (2012)
Regulatory Variation Within Between Species
Wei Zheng et al.
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 12 (2011)
Sperm Methylation Profiles Reveal Features of Epigenetic Inheritance and Evolution in Primates
Antoine Molaro et al.
CELL (2011)
Gene Expression Differences Among Primates Are Associated With Changes in a Histone Epigenetic Modification
Carolyn E. Cain et al.
GENETICS (2011)
Phyloepigenomic comparison of great apes reveals a correlation between somatic and germline methylation states
David I. K. Martin et al.
GENOME RESEARCH (2011)
Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization
Alex Tsankov et al.
GENOME RESEARCH (2011)
Evolution of Nucleosome Occupancy: Conservation of Global Properties and Divergence of Gene-Specific Patterns
Kyle Tsui et al.
MOLECULAR AND CELLULAR BIOLOGY (2011)
Human-specific loss of regulatory DNA and the evolution of human-specific traits
Cory Y. McLean et al.
NATURE (2011)
Mapping and analysis of chromatin state dynamics in nine human cell types
Jason Ernst et al.
NATURE (2011)
The evolution of gene expression levels in mammalian organs
David Brawand et al.
NATURE (2011)
Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals
Vincent J. Lynch et al.
NATURE GENETICS (2011)
Identification of a functional transposon insertion in the maize domestication gene tb1
Anthony Studer et al.
NATURE GENETICS (2011)
Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data
Gregory M. Cooper et al.
NATURE REVIEWS GENETICS (2011)
Molecular spandrels: tests of adaptation at the genetic level
Rowan D. H. Barrett et al.
NATURE REVIEWS GENETICS (2011)
Evolutionary origin of a novel gene expression pattern through co-option of the latent activities of existing regulatory sequences
Mark Rebeiz et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
optix Drives the Repeated Convergent Evolution of Butterfly Wing Pattern Mimicry
Robert D. Reed et al.
SCIENCE (2011)
The Developmental Role of Agouti in Color Pattern Evolution
Marie Manceau et al.
SCIENCE (2011)
The study of eQTL variations by RNA-seq: from SNPs to phenotypes
Jacek Majewski et al.
TRENDS IN GENETICS (2011)
Genomic and chromatin signals underlying transcription start-site selection
Eivind Valen et al.
TRENDS IN GENETICS (2011)
Coupled Evolution of Transcription and mRNA Degradation
Mally Dori-Bachash et al.
PLOS BIOLOGY (2011)
De Novo Genesis of Enhancers in Vertebrates
Michael P. Eichenlaub et al.
PLOS BIOLOGY (2011)
MicroRNA-Driven Developmental Remodeling in the Brain Distinguishes Humans from Other Primates
Mehmet Somel et al.
PLOS BIOLOGY (2011)
Consequences of Eukaryotic Enhancer Architecture for Gene Expression Dynamics, Development, and Fitness
Michael Z. Ludwig et al.
PLOS GENETICS (2011)
A Conserved Developmental Patterning Network Produces Quantitatively Different Output in Multiple Species of Drosophila
Charless C. Fowlkes et al.
PLOS GENETICS (2011)
Distinct Functional Constraints Partition Sequence Conservation in a cis-Regulatory Element
Antoine Barriere et al.
PLOS GENETICS (2011)
A Genome-Wide Study of DNA Methylation Patterns and Gene Expression Levels in Multiple Human and Chimpanzee Tissues
Athma A. Pai et al.
PLOS GENETICS (2011)
MicroRNA Expression and Regulation in Human, Chimpanzee, and Macaque Brains
Hai Yang Hu et al.
PLOS GENETICS (2011)
Sex-specific and lineage-specific alternative splicing in primates
Ran Blekhman et al.
GENOME RESEARCH (2010)
Sequence features that drive human promoter function and tissue specificity
Jane M. Landolin et al.
GENOME RESEARCH (2010)
Polygenic and directional regulatory evolution across pathways in Saccharomyces
James H. Bullard et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer
Yingguang Frank Chan et al.
SCIENCE (2010)
Variation in Transcription Factor Binding Among Humans
Maya Kasowski et al.
SCIENCE (2010)
Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding
Dominic Schmidt et al.
SCIENCE (2010)
Epistasis in a quantitative trait captured by a molecular model of transcription factor interactions
Jason Gertz et al.
THEORETICAL POPULATION BIOLOGY (2010)
Gene regulation and the origins of human biological uniqueness
Samuel J. Sholtis et al.
TRENDS IN GENETICS (2010)
Genome-wide maps of transcription regulatory elements
Noboru J. Sakabe et al.
WILEY INTERDISCIPLINARY REVIEWS-SYSTEMS BIOLOGY AND MEDICINE (2010)
Binding Site Turnover Produces Pervasive Quantitative Changes in Transcription Factor Binding between Closely Related Drosophila Species
Robert K. Bradley et al.
PLOS BIOLOGY (2010)
The Role of Nucleosome Positioning in the Evolution of Gene Regulation
Alexander M. Tsankov et al.
PLOS BIOLOGY (2010)
Intergenic and Repeat Transcription in Human, Chimpanzee and Macaque Brains Measured by RNA-Seq
Augix Guohua Xu et al.
PLOS COMPUTATIONAL BIOLOGY (2010)
Gene-Environment Interactions at Nucleotide Resolution
Justin Gerke et al.
PLOS GENETICS (2010)
Incipient Balancing Selection through Adaptive Loss of Aquaporins in Natural Saccharomyces cerevisiae Populations
Jessica L. Will et al.
PLOS GENETICS (2010)
A Humanized Version of Foxp2 Affects Cortico-Basal Ganglia Circuits in Mice
Wolfgang Enard et al.
CELL (2009)
Constructing genomic maps of positive selection in humans: Where do we go from here?
Joshua M. Akey
GENOME RESEARCH (2009)
An ensemble model of competitive multi-factor binding of the genome
Todd Wasson et al.
GENOME RESEARCH (2009)
Incorporating nucleosomes into thermodynamic models of transcription regulation
Tali Raveh-Sadka et al.
GENOME RESEARCH (2009)
Signals of recent positive selection in a worldwide sample of human populations
Joseph K. Pickrell et al.
GENOME RESEARCH (2009)
Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization
Yair Field et al.
NATURE GENETICS (2009)
RNA-Seq: a revolutionary tool for transcriptomics
Zhong Wang et al.
NATURE REVIEWS GENETICS (2009)
From DNA sequence to transcriptional behaviour: a quantitative approach
Eran Segal et al.
NATURE REVIEWS GENETICS (2009)
Differences in human and chimpanzee gene expression patterns define an evolving network of transcription factors in brain
Katja Nowick et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Transcriptional neoteny in the human brain
Mehmet Somel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Genetic Interactions Between Transcription Factors Cause Natural Variation in Yeast
Justin Gerke et al.
SCIENCE (2009)
A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation
Itay Tirosh et al.
SCIENCE (2009)
Unstable Tandem Repeats in Promoters Confer Transcriptional Evolvability
Marcelo D. Vinces et al.
SCIENCE (2009)
Evo-devo and an expanding evolutionary synthesis: A genetic theory of morphological evolution
Sean B. Carroll
CELL (2008)
The loci of evolution: How predictable is genetic evolution ?
David L. Stern et al.
EVOLUTION (2008)
A novel mode of enhancer evolution: The Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity
Aileen M. Smith et al.
GENOME RESEARCH (2008)
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
John C. Marioni et al.
GENOME RESEARCH (2008)
Evolution of the mammalian transcription factor binding repertoire via transposable elements
Guillaume Bourque et al.
GENOME RESEARCH (2008)
Predicting expression patterns from regulatory sequence in Drosophila segmentation
Eran Segal et al.
NATURE (2008)
Regulatory changes underlying expression differences within and between Drosophila species
Patricia J. Wittkopp et al.
NATURE GENETICS (2008)
Species-specific transcription in mice carrying human chromosome 21
Michael D. Wilson et al.
SCIENCE (2008)
Human-specific gain of function in a developmental enhancer
Shyam Prabhakar et al.
SCIENCE (2008)
Revealing the architecture of gene regulation: the promise of eQTL studies
Yoav Gilad et al.
TRENDS IN GENETICS (2008)
Evolution Acts on Enhancer Organization to Fine-Tune Gradient Threshold Readouts
Justin Crocker et al.
PLOS BIOLOGY (2008)
Genome-wide detection and characterization of positive selection in human populations
Pardis C. Sabeti et al.
NATURE (2007)
Frequent gain and loss of functional transcription factor binding sites
Scott W. Doniger et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
Nathaniel D. Heintzman et al.
NATURE GENETICS (2007)
The evolutionary significance of cis-regulatory mutations
Gregory A. Wray
NATURE REVIEWS GENETICS (2007)
Localizing recent adaptive evolution in the human genome
Scott H. Williamson et al.
PLOS GENETICS (2007)
Quantitative and predictive model of transcriptional control of the Drosophila melanogaster even skipped gene
Hilde Janssens et al.
NATURE GENETICS (2006)
An RNA gene expressed during cortical development evolved rapidly in humans
Katherine S. Pollard et al.
NATURE (2006)
Natural selection on gene expression
Yoav Gilad et al.
TRENDS IN GENETICS (2006)
A single amino acid mutation contributes to adaptive beach mouse color pattern
Hopi E. Hoekstra et al.
SCIENCE (2006)
How reliable are empirical genomic scans for selective sweeps?
Kosuke M. Teshima et al.
GENOME RESEARCH (2006)
A distant upstream enhancer at the maize domestication gene tb1 has pleiotropic effects on plant and inflorescent architecture
RM Clark et al.
NATURE GENETICS (2006)
Neutral and adaptive variation in gene expression
A Whitehead et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
A map of recent positive selection in the human genome (vol 4, pg 154, 2006)
BF Voight et al.
PLOS BIOLOGY (2006)
Expression profiling in primates reveals a rapid evolution of human transcription factors
Y Gilad et al.
NATURE (2006)
A map of recent positive selection in the human genome
BF Voight et al.
PLOS BIOLOGY (2006)
Evolution of primate gene expression
Philipp Khaitovich et al.
NATURE REVIEWS GENETICS (2006)
Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila
CR Landry et al.
GENETICS (2005)
A mutation accumulation assay reveals a broad capacity for rapid evolution of gene expression
SA Rifkin et al.
NATURE (2005)
An aneuploid mouse strain carrying human chromosome 21 with Down syndrome phenotypes
A O'Doherty et al.
SCIENCE (2005)
Local regulatory variation in Saccharomyces cerevisiae
J Ronald et al.
PLOS GENETICS (2005)
From genome to epigenome
A Murrell et al.
HUMAN MOLECULAR GENETICS (2005)
Functional evolution of a cis-regulatory module
MZ Ludwig et al.
PLOS BIOLOGY (2005)
Long-range control of gene expression: Emerging mechanisms and disruption in disease
DA Kleinjan et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2005)
The molecular elements that underlie developmental evolution
CR Alonso et al.
NATURE REVIEWS GENETICS (2005)
Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks
MD Shapiro et al.
NATURE (2004)
Meat-adaptive genes and the evolution of slower aging in humans
CE Finch et al.
QUARTERLY REVIEW OF BIOLOGY (2004)
Histone H3 lysine 4 methylation patterns in higher eukaryotic genes
R Schneider et al.
NATURE CELL BIOLOGY (2004)
Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals
R Jaenisch et al.
NATURE GENETICS (2003)
Evolution of gene expression in the Drosophila melanogaster subgroup
SA Rifkin et al.
NATURE GENETICS (2003)
Molecular evolution of FOXP2, a gene involved in speech and language
W Enard et al.
NATURE (2002)
Genetic dissection of transcriptional regulation in budding yeast
RB Brem et al.
SCIENCE (2002)
Intra- and interspecific variation in primate gene expression patterns
W Enard et al.
SCIENCE (2002)
Evidence of tree gouging and exudate eating in pygmy slow lorises (Nycticebus pygmaeus)
CL Tan et al.
FOLIA PRIMATOLOGICA (2001)
分享论文
