相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The Proteomics Identifications (PRIDE) database and associated tools: status in 2013
Juan Antonio Vizcaino et al.
NUCLEIC ACIDS RESEARCH (2013)
A review of statistical methods for protein identification using tandem mass spectrometry
William Noble et al.
Statistics and Its Interface (2013)
Using ion purity scores for enhancing quantitative accuracy and precision in complex proteomics samples
Scott J. Geromanos et al.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2012)
Extracted fragment ion mobility distributions: A new method for complex mixture analysis
Sunyoung Lee et al.
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY (2012)
Optimized Fast and Sensitive Acquisition Methods for Shotgun Proteomics on a Quadrupole Orbitrap Mass Spectrometer
Christian D. Kelstrup et al.
JOURNAL OF PROTEOME RESEARCH (2012)
Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis
Ludovic C. Gillet et al.
MOLECULAR & CELLULAR PROTEOMICS (2012)
Nanoparticle Size Is a Critical Physicochemical Determinant of the Human Blood Plasma Corona: A Comprehensive Quantitative Proteomic Analysis
Stefan Tenzer et al.
ACS NANO (2011)
Faster, Quantitative, and Accurate Precursor Acquisition Independent From Ion Count
Alexandre Panchaud et al.
ANALYTICAL CHEMISTRY (2011)
A Statistical Method for Assessing Peptide Identification Confidence in Accurate Mass and Time Tag Proteomics
Jeffrey R. Stanley et al.
ANALYTICAL CHEMISTRY (2011)
Using Ion Mobility Data to Improve Peptide Identification: Intrinsic Amino Acid Size Parameters
Stephen J. Valentine et al.
JOURNAL OF PROTEOME RESEARCH (2011)
More than 100,000 Detectable Peptide Species Elute in Single Shotgun Proteomics Runs but the Majority is Inaccessible to Data-Dependent LC-MS/MS
Annette Michalski et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Effect of Collision Energy Optimization on the Measurement of Peptides by Selected Reaction Monitoring (SRM) Mass Spectrometry
Brendan MacLean et al.
ANALYTICAL CHEMISTRY (2010)
Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
Brendan MacLean et al.
BIOINFORMATICS (2010)
An LC-IMS-MS Platform Providing Increased Dynamic Range for High-Throughput Proteomic Studies
Erin Shammel Baker et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Proteomics on an Orbitrap Benchtop Mass Spectrometer Using All-ion Fragmentation
Tamar Geiger et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Retention time alignment algorithms for LC/MS data must consider non-linear shifts
Katharina Podwojski et al.
BIOINFORMATICS (2009)
Universal sample preparation method for proteome analysis
Jacek R. Wisniewski et al.
NATURE METHODS (2009)
Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures
Guo-Zhong Li et al.
PROTEOMICS (2009)
The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS
Scott J. Geromanos et al.
PROTEOMICS (2009)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
Absolute quantification of proteins by LCMSE - A virtue of parallel MS acquisition
JC Silva et al.
MOLECULAR & CELLULAR PROTEOMICS (2006)
Quantitative proteomic analysis by accurate mass retention time pairs
JC Silva et al.
ANALYTICAL CHEMISTRY (2005)
Applications of a travelling wave-based radio-frequencyonly stacked ring ion guide
K Giles et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2004)
Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra
JD Venable et al.
NATURE METHODS (2004)
A statistical model for identifying proteins by tandem mass spectrometry
AI Nesvizhskii et al.
ANALYTICAL CHEMISTRY (2003)
Mass spectrometry-based proteomics
R Aebersold et al.
NATURE (2003)