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Bin Qian et al.
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Ingemar Andre et al.
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Elodie Ghedin et al.
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Pawel Gorecki et al.
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FUNC:: a package for detecting significant associations between gene sets and ontological annotations
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Physically realistic homology models built with ROSETTA can be more accurate than their templates
KMS Misura et al.
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TM Panhuis et al.
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B Schilling et al.
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Makedonka Mitreva et al.
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MW Robinson et al.
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TM-align: a protein structure alignment algorithm based on the TM-score
Y Zhang et al.
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NJ Mulder et al.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
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L Ding et al.
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A combined transmembrane topology and signal peptide prediction method
L Käll et al.
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M Mitreva et al.
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OrthoMCL: Identification of ortholog groups for eukaryotic genomes
L Li et al.
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PCAP: A whole-genome assembly program
XQ Huang et al.
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Limited microsynteny between the genomes of Pristionchus pacificus and Caenorhabditis elegans
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LD Stein et al.
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AR Ortiz et al.
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