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Cole Trapnell et al.
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Genis Parra et al.
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E Quevillon et al.
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AL Price et al.
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PILER: identification and classification of genomic repeats
RC Edgar et al.
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Repbase update, a database of eukaryotic repetitive elements
J Jurka et al.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
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M Stanke et al.
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GeneWise and genomewise
E Birney et al.
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L Li et al.
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