相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。One-Cell Doubling Evaluation by Living Arrays of Yeast, ODELAY!
Thurston Herricks et al.
G3-GENES GENOMES GENETICS (2017)
Compositionally distinct nuclear pore complexes of functionally distinct dimorphic nuclei in the ciliate Tetrahymena
Masaaki Iwamoto et al.
JOURNAL OF CELL SCIENCE (2017)
Biomechanics of the transport barrier in the nuclear pore complex
George J. Stanley et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2017)
Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex
Paula Upla et al.
STRUCTURE (2017)
Comparative interactomics provides evidence for functional specialization of the nuclear pore complex
Samson O. Obado et al.
NUCLEUS (2017)
Comparative interactomics provides evidence for functional specialization of the nuclear pore complex
Samson O. Obado et al.
NUCLEUS (2017)
Assessing Exhaustiveness of Stochastic Sampling for Integrative Modeling of Macromolecular Structures
Shruthi Viswanath et al.
BIOPHYSICAL JOURNAL (2017)
The Nuclear Pore Complex as a Flexible and DynamicGate
Kevin E. Knockenhauer et al.
CELL (2016)
Structure and Function of the Nuclear Pore Complex Cytoplasmic mRNA Export Platform
Javier Fernandez-Martinez et al.
CELL (2016)
Nucleoporin genes in human diseases
Valeria Nofrini et al.
EUROPEAN JOURNAL OF HUMAN GENETICS (2016)
Simple rules for passive diffusion through the nuclear pore complex
Benjamin L. Timney et al.
JOURNAL OF CELL BIOLOGY (2016)
The Malleable Nature of the Budding Yeast Nuclear Envelope: Flares, Fusion, and Fenestrations
Rebecca A. Meseroll et al.
JOURNAL OF CELLULAR PHYSIOLOGY (2016)
The Multiple Faces of Disordered Nucleoporins
Edward A. Lemke
JOURNAL OF MOLECULAR BIOLOGY (2016)
Structure Determination of the Nuclear Pore Complex with Three-Dimensional Cryo electron Microscopy
Alexander von Appen et al.
JOURNAL OF MOLECULAR BIOLOGY (2016)
Alignment algorithms and per-particle CTF correction for single particle cryo-electron tomography
Jesus G. Galaz-Montoya et al.
JOURNAL OF STRUCTURAL BIOLOGY (2016)
Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions
S. Jonic et al.
JOURNAL OF STRUCTURAL BIOLOGY (2016)
Spatiotemporal dynamics of the nuclear pore complex transport barrier resolved by high-speed atomic force microscopy
Yusuke Sakiyama et al.
NATURE NANOTECHNOLOGY (2016)
Resolving macromolecular structures from electron cryo-tomography data using subtomogram averaging in RELION
Tanmay A. M. Bharat et al.
NATURE PROTOCOLS (2016)
Slide-and-exchange mechanism for rapid and selective transport through the nuclear pore complex
Barak Raveh et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Measurement of the accurate mass of a 50 MDa infectious virus
David Z. Keifer et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2016)
Architecture of the symmetric core of the nuclear pore
Daniel H. Lin et al.
SCIENCE (2016)
Molecular architecture of the inner ring scaffold of the human nuclear pore complex
Jan Kosinski et al.
SCIENCE (2016)
Interactome Mapping Reveals the Evolutionary History of the Nuclear Pore Complex
Samson O. Obado et al.
PLOS BIOLOGY (2016)
Plasticity of an Ultrafast Interaction between Nucleoporins and Nuclear Transport Receptors
Sigrid Milles et al.
CELL (2015)
Nuclear Pore Basket Proteins Are Tethered to the Nuclear Envelope and Can Regulate Membrane Curvature
Noemi Meszaros et al.
DEVELOPMENTAL CELL (2015)
Assembly and Molecular Architecture of the Phosphoinositide 3-Kinase p85α Homodimer
Jaclyn LoPiccolo et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
The nuclear basket mediates perinuclear mRNA scanning in budding yeast
Mark-Albert Saroufim et al.
JOURNAL OF CELL BIOLOGY (2015)
Single particle tomography in EMAN2
Jesus G. Galaz-Montoya et al.
JOURNAL OF STRUCTURAL BIOLOGY (2015)
Architecture of the Human and Yeast General Transcription and DNA Repair Factor TFIIH
Jie Luo et al.
MOLECULAR CELL (2015)
In situ structural analysis of the human nuclear pore complex
Alexander von Appen et al.
NATURE (2015)
A strategy for dissecting the architectures of native macromolecular assemblies
Yi Shi et al.
NATURE METHODS (2015)
Rapid, optimized interactomic screening
Zhanna Hakhverdyan et al.
NATURE METHODS (2015)
The architecture of a eukaryotic replisome
Jingchuan Sun et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
Linker Nups connect the nuclear pore complex inner ring with the outer ring and transport channel
Jessica Fischer et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
Advances in Single-Particle Electron Cryomicroscopy Structure Determination applied to Sub-tomogram Averaging
Tanmay A. M. Bharat et al.
STRUCTURE (2015)
Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop
Andrej Sali et al.
STRUCTURE (2015)
Structure and gating of the nuclear pore complex
Matthias Eibauer et al.
NATURE COMMUNICATIONS (2015)
The architecture of a eukaryotic replisome
Jingchuan Sun et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
Linker Nups connect the nuclear pore complex inner ring with the outer ring and transport channel
Jessica Fischer et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
The molecular mechanism of nuclear transport revealed by atomic-scale measurements
Loren E. Hough et al.
ELIFE (2015)
Molecular architecture of the yeast Mediator complex
Philip J. Robinson et al.
ELIFE (2015)
The dynamic conformational landscape of γ-secretase
Nadav Elad et al.
JOURNAL OF CELL SCIENCE (2015)
Molecular Architecture of the 40S • eIF1 • eIF3 Translation Initiation Complex
Jan P. Erzberger et al.
CELL (2014)
The multifunctional nuclear pore complex: a platform for controlling gene expression
Christopher Ptak et al.
CURRENT OPINION IN CELL BIOLOGY (2014)
Uncertainty in integrative structural modeling
Dina Schneidman-Duhovny et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2014)
Nucleoporin FG Domains Facilitate mRNP Remodeling at the Cytoplasmic Face of the Nuclear Pore Complex
Rebecca L. Adams et al.
GENETICS (2014)
Integrative Structure-Function Mapping of the Nucleoporin Nup133 Suggests a Conserved Mechanism for Membrane Anchoring of the Nuclear Pore Complex
Seung Joong Kim et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Molecular Architecture and Function of the SEA Complex, a Modulator of the TORC1 Pathway
Romain Algret et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Structural Characterization by Cross-linking Reveals the Detailed Architecture of a Coatomer-related Heptameric Module from the Nuclear Pore Complex
Yi Shi et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Quantifying the local resolution of cryo-EMEM density maps
Alp Kucukelbir et al.
NATURE METHODS (2014)
Reconstitution of active human core Mediator complex reveals a critical role of the MED14 subunit
Murat A. Cevher et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes
Alexander Leitner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Sensing Membrane Stresses by Protein Insertions
Felix Campelo et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Integrated Structural Analysis of the Human Nuclear Pore Complex Scaffold
Khanh Huy Bui et al.
CELL (2013)
Uncovering Nuclear Pore Complexity with Innovation
Rebecca L. Adams et al.
CELL (2013)
Structural biology in situ - the potential of subtomogram averaging
John A. G. Briggs
CURRENT OPINION IN STRUCTURAL BIOLOGY (2013)
Charge Detection Mass Spectrometry with Resolved Charge States
Nathan C. Contino et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2013)
The nuclear basket proteins Mlp1p and Mlp2p are part of a dynamic interactome including Esc1p and the proteasome
Mario Niepel et al.
MOLECULAR BIOLOGY OF THE CELL (2013)
Scalable web services for the PSIPRED Protein Analysis Workbench
Daniel W. A. Buchan et al.
NUCLEIC ACIDS RESEARCH (2013)
Report of the wwPDB Small-Angle Scattering Task Force: Data Requirements for Biomolecular Modeling and the PDB
Jill Trewhella et al.
STRUCTURE (2013)
Structure, Dynamics, Evolution, and Function of a Major Scaffold Component in the Nuclear Pore Complex
Parthasarathy Sampathkumar et al.
STRUCTURE (2013)
Recommendations of the wwPDB NMR Validation Task Force
Gaetano T. Montelione et al.
STRUCTURE (2013)
Vesicle coats: structure, function, and general principles of assembly
Marco Faini et al.
TRENDS IN CELL BIOLOGY (2013)
Cell-Cycle-Coupled Structural Oscillation of Centromeric Nucleosomes in Yeast
Manjunatha Shivaraju et al.
CELL (2012)
Dimerization and direct membrane interaction of Nup53 contribute to nuclear pore complex assembly
Benjamin Vollmer et al.
EMBO JOURNAL (2012)
Structure-function mapping of a heptameric module in the nuclear pore complex
Javier Fernandez-Martinez et al.
JOURNAL OF CELL BIOLOGY (2012)
Expanding the Chemical Cross-Linking Toolbox by the Use of Multiple Proteases and Enrichment by Size Exclusion Chromatography
Alexander Leitner et al.
MOLECULAR & CELLULAR PROTEOMICS (2012)
Identification of cross-linked peptides from complex samples
Bing Yang et al.
NATURE METHODS (2012)
Saccharomyces Genome Database: the genomics resource of budding yeast
J. Michael Cherry et al.
NUCLEIC ACIDS RESEARCH (2012)
Outcome of the First Electron Microscopy Validation Task Force Meeting
Richard Henderson et al.
STRUCTURE (2012)
Iterative Stable Alignment and Clustering of 2D Transmission Electron Microscope Images
Zhengfan Yang et al.
STRUCTURE (2012)
Integrative structural modeling with small angle X-ray scattering profiles
Dina Schneidman-Duhovny et al.
BMC STRUCTURAL BIOLOGY (2012)
Putting the Pieces Together: Integrative Modeling Platform Software for Structure Determination of Macromolecular Assemblies
Daniel Russel et al.
PLOS BIOLOGY (2012)
Quantitative Analysis of Cohesin Complex Stoichiometry and SMC3 Modification-Dependent Protein Interactions
Chen Ding et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Global quantification of mammalian gene expression control
Bjoern Schwanhaeusser et al.
NATURE (2011)
Multicoil2: Predicting Coiled Coils and Their Oligomerization States from Sequence in the Twilight Zone
Jason Trigg et al.
PLOS ONE (2011)
Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex
Parthasarathy Sampathkumar et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2011)
Long Unfolded Linkers Facilitate Membrane Protein Import Through the Nuclear Pore Complex
Anne C. Meinema et al.
SCIENCE (2011)
A New Generation of Crystallographic Validation Tools for the Protein Data Bank
Randy J. Read et al.
STRUCTURE (2011)
Dbp5, Gle1-IP6 and Nup159 A working model for mRNP export
Andrew W. Folkmann et al.
NUCLEUS (2011)
Determination of Ensemble-Average Pairwise Root Mean-Square Deviation from Experimental B-Factors
Antonija Kuzmanic et al.
BIOPHYSICAL JOURNAL (2010)
A Bimodal Distribution of Two Distinct Categories of Intrinsically Disordered Structures with Separate Functions in FG Nucleoporins
Justin Yamada et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
FoXS: a web server for rapid computation and fitting of SAXS profiles
Dina Schneidman-Duhovny et al.
NUCLEIC ACIDS RESEARCH (2010)
Structure of a putative BenF-like porin from Pseudomonas fluorescens Pf-5 at 2.6 Å resolution
Parthasarathy Sampathkumar et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)
Structural and functional analysis of Nup120 suggests ring formation of the Nup84 complex
Hyuk-Soo Seo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Integrating diverse data for structure determination of macromolecular assemblies
Frank Alber et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2008)
HELIQUEST:: a web server to screen sequences with specific α-helical properties
Romain Gautier et al.
BIOINFORMATICS (2008)
Multiple Subunit Fitting into a Low-Resolution Density Map of a Macromolecular Complex Using a Gaussian Mixture Model
Takeshi Kawabata
BIOPHYSICAL JOURNAL (2008)
A Fence-like Coat for the Nuclear Pore Membrane
Erik W. Debler et al.
MOLECULAR CELL (2008)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
Determining the architectures of macromolecular assemblies
Frank Alber et al.
NATURE (2007)
The molecular architecture of the nuclear pore complex
Frank Alber et al.
NATURE (2007)
Comprehensive analysis of diverse ribonucleoprotein complexes
Marlene Oeffinger et al.
NATURE METHODS (2007)
Natively unfolded nucleoporins gate protein diffusion across the nuclear pore complex
Samir S. Patel et al.
CELL (2007)
A synthetic protein approach toward accurate mass spectrometric quantification of component stoichiometry of multiprotein complexes
Keiji Kito et al.
JOURNAL OF PROTEOME RESEARCH (2007)
A general amphipathic α-helical motif for sensing membrane curvature
Guillaume Drin et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2007)
Significant proportions of with reduced intracellular nuclear transport proteins mobilities resolved by fluorescence correlation spectroscopy
Allison Paradise et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
UCSF tomography: An integrated software suite for real-time electron microscopic tomographic data collection, alignment, and reconstruction
Shawn Q. Zheng et al.
JOURNAL OF STRUCTURAL BIOLOGY (2007)
Statistical potential for assessment and prediction of protein structures
Min-Yi Shen et al.
PROTEIN SCIENCE (2006)
Structure of the Blm10-20 S proteasome complex by cryo-electron microscopy. Insights into the mechanism of activation of mature yeast proteasomes
Jack Iwanczyk et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Flexible phenylalanine-glycine nucleoporins as entropic barriers to nucleocytoplasmic transport
Roderick Y. H. Lim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes
Julie M. Pratt et al.
NATURE PROTOCOLS (2006)
Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides
RJ Beynon et al.
NATURE METHODS (2005)
The HHpred interactive server for protein homology detection and structure prediction
J Söding et al.
NUCLEIC ACIDS RESEARCH (2005)
Protein homology detection by HMM-HMM comparison
J Söding
BIOINFORMATICS (2005)
The DISOPRED server for the prediction of protein disorder
JJ Ward et al.
BIOINFORMATICS (2004)
Components of coated vesicles and nuclear pore complexes share a common molecular architecture
D Devos et al.
PLOS BIOLOGY (2004)
Nuclear pore complex structure and dynamics revealed by cryoelectron tomography
M Beck et al.
SCIENCE (2004)
Disorder in the nuclear pore complex: The FG repeat regions of nucleoporins are natively unfolded
DP Denning et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Rapid protein domain assignment from amino acid sequence using predicted secondary structure
RL Marsden et al.
PROTEIN SCIENCE (2002)
A link between the synthesis of nucleoporins and the biogenesis of the nuclear envelope
M Marelli et al.
JOURNAL OF CELL BIOLOGY (2001)
A robust, detergent-friendly method for mass spectrometric analysis of integral membrane proteins
M Cadene et al.
ANALYTICAL CHEMISTRY (2000)
The yeast nuclear pore complex: Composition, architecture, and transport mechanism
MP Rout et al.
JOURNAL OF CELL BIOLOGY (2000)