4.6 Article

Defining the budding yeast chromatin-associated interactome

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

A RSC/Nucleosome Complex Determines Chromatin Architecture and Facilitates Activator Binding

Monique Floer et al.

Review Cell Biology

The transcriptional interactome: gene expression in 3D

Stefan Schoenfelder et al.

CURRENT OPINION IN GENETICS & DEVELOPMENT (2010)

Review Biochemistry & Molecular Biology

Of proteins and DNA-proteomic role in the field of chromatin research

Jean-Philippe Lambert et al.

MOLECULAR BIOSYSTEMS (2010)

Article Multidisciplinary Sciences

A three-dimensional model of the yeast genome

Zhijun Duan et al.

NATURE (2010)

Article Multidisciplinary Sciences

Transcriptional role of cyclin D1 in development revealed by a genetic-proteomic screen

Frederic Bienvenu et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

Dynamic changes in histone acetylation regulate origins of DNA replication

Ashwin Unnikrishnan et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)

Article Biochemistry & Molecular Biology

A native chromatin purification system for epigenomic profiling in Caenorhabditis elegans

Siew Loon Ooi et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

A Global Protein Kinase and Phosphatase Interaction Network in Yeast

Ashton Breitkreutz et al.

SCIENCE (2010)

Review Genetics & Heredity

Histones: Annotating Chromatin

Eric I. Campos et al.

ANNUAL REVIEW OF GENETICS (2009)

Article Biochemistry & Molecular Biology

Purification of Proteins Associated with Specific Genomic Loci

Jerome Dejardin et al.

Article Cell Biology

Bck2 is a phase-independent activator of cell cycle-regulated genes in yeast

Francisco Ferrezuelo et al.

CELL CYCLE (2009)

Article Biochemistry & Molecular Biology

An integrated workflow for charting the human interaction proteome: insights into the PP2A system

Timo Glatter et al.

MOLECULAR SYSTEMS BIOLOGY (2009)

Article Multidisciplinary Sciences

An oestrogen-receptor-α-bound human chromatin interactome

Melissa J. Fullwood et al.

NATURE (2009)

Review Genetics & Heredity

Applying mass spectrometry-based proteomics to genetics, genomics and network biology

Matthias Gstaiger et al.

NATURE REVIEWS GENETICS (2009)

Article Biochemistry & Molecular Biology

An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe

Hyun-Soo Kim et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Yeast Ste23p shares functional similarities with mammalian insulin-degrading enzymes

Benjamin J. Alper et al.

Article Biochemistry & Molecular Biology

Isolation of novel coregulatory protein networks associated with DNA-bound estrogen receptor alpha

Jennifer R. Schultz-Norton et al.

BMC MOLECULAR BIOLOGY (2008)

Article Biochemical Research Methods

A Novel Proteomics Approach for the Discovery of Chromatin-associated Protein Networks

Jean-Philippe Lambert et al.

MOLECULAR & CELLULAR PROTEOMICS (2008)

Article Biochemistry & Molecular Biology

Chaperone control of the activity and specificity of the histone H3 acetyltransferase Rtt109

Jeffrey Fillingham et al.

MOLECULAR AND CELLULAR BIOLOGY (2008)

Article Multidisciplinary Sciences

Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics

Mihaela E. Sardiu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

CTCF physically links cohesin to chromatin

Eric D. Rubio et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Review Biochemistry & Molecular Biology

Prolyl cis-trans isomerization as a molecular timer

Kun Ping Lu et al.

NATURE CHEMICAL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Global assessment of combinatorial post-translational modification of core histones in yeast using contemporary mass spectrometry

Lihua Jiang et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2007)

Article Biochemistry & Molecular Biology

Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators

Melissa W. Adkins et al.

MOLECULAR AND CELLULAR BIOLOGY (2007)

Review Cell Biology

Analysis of protein complexes using mass spectrometry

Anne-Claude Gingras et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)

Article Biochemical Research Methods

Affinity-purification mass spectrometry (AP-MS) of serine/threonine phosphatases

Ginny I. Chen et al.

METHODS (2007)

Article Biochemistry & Molecular Biology

High-resolution profiling of histone methylations in the human genome

Artern Barski et al.

Article Biochemistry & Molecular Biology

A novel role for histone chaperones CAF-1 and Rtt106p in heterochromatin silencing

Shengbing Huang et al.

EMBO JOURNAL (2007)

Article Biochemical Research Methods

Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

Sean R. Collins et al.

MOLECULAR & CELLULAR PROTEOMICS (2007)

Article Biochemistry & Molecular Biology

Large-scale mapping of human protein-protein interactions by mass spectrometry

Rob M. Ewing et al.

MOLECULAR SYSTEMS BIOLOGY (2007)

Article Multidisciplinary Sciences

Long-distance combinatorial linkage between methylation and acetylation on histone H3N termini

Sean D. Taverna et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Review Biochemistry & Molecular Biology

Characterization of histones and their post-translational modifications by mass spectrometry

Benjamin A. Garcia et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

IntAct - open source resource for molecular interaction data

S. Kerrien et al.

NUCLEIC ACIDS RESEARCH (2007)

Review Biochemistry & Molecular Biology

Unraveling transcription regulatory networks by protein-DNA and protein-protein interaction mapping

Albertha J. M. Walhout

GENOME RESEARCH (2006)

Review Cell Biology

Transcriptional control thrown for a loop

Peter Fraser

CURRENT OPINION IN GENETICS & DEVELOPMENT (2006)

Review Cell Biology

Nucleosome displacement in transcription

Jerry L. Workman

GENES & DEVELOPMENT (2006)

Article Multidisciplinary Sciences

Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis

J Recht et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Proteome survey reveals modularity of the yeast cell machinery

AC Gavin et al.

NATURE (2006)

Article Multidisciplinary Sciences

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

NJ Krogan et al.

NATURE (2006)

Article Biochemical Research Methods

Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry

D Bonenfant et al.

MOLECULAR & CELLULAR PROTEOMICS (2006)

Article Biochemical Research Methods

Mass spectrometric characterization of human histone H3: A bird's eye view

CE Thomas et al.

JOURNAL OF PROTEOME RESEARCH (2006)

Article Biochemistry & Molecular Biology

BioGRID: a general repository for interaction datasets

Chris Stark et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemistry & Molecular Biology

Replication-independent histone deposition by the HIR complex and Asf1

EM Green et al.

CURRENT BIOLOGY (2005)

Article Multidisciplinary Sciences

Rtt106p is a histone chaperone involved in heterochromatin-mediated silencing

SB Huang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

Histones are incorporated in trans during reassembly of the yeast PHO5 promoter

UJ Schermer et al.

MOLECULAR CELL (2005)

Article Multidisciplinary Sciences

Structural basis for the interaction of Asf1 with histone H3 and its functional implications

F Mousson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Anatomy & Morphology

Analyzing protein complexes in Drosophila with tandem affinity purification-mass spectrometry

A Veraksa et al.

DEVELOPMENTAL DYNAMICS (2005)

Article Biochemistry & Molecular Biology

Construction, verification and experimental use of two epitope-tagged collections budding yeast strains

R Howson et al.

COMPARATIVE AND FUNCTIONAL GENOMICS (2005)

Review Cell Biology

The budding yeast spindle pole body: Structure, duplication, and function

SL Jaspersen et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY (2004)

Article Multidisciplinary Sciences

Global analysis of protein expression in yeast

S Ghaemmaghami et al.

NATURE (2003)

Article Multidisciplinary Sciences

Global analysis of protein localization in budding yeast

WK Huh et al.

NATURE (2003)

Article Biochemistry & Molecular Biology

AMPK β subunit targets metabolic stress sensing to glycogen

G Polekhina et al.

CURRENT BIOLOGY (2003)

Article Biochemistry & Molecular Biology

A conserved RING finger protein required for histone H2B monoubiquitination and cell size control

WW Hwang et al.

MOLECULAR CELL (2003)

Article Biochemistry & Molecular Biology

Cytoscape: A software environment for integrated models of biomolecular interaction networks

P Shannon et al.

GENOME RESEARCH (2003)

Article Biochemistry & Molecular Biology

Crp1p, a new cruciform DNA-binding protein in the yeast Saccharomyces cerevisiae

U Rass et al.

JOURNAL OF MOLECULAR BIOLOGY (2002)

Article Medicine, Research & Experimental

Constitutively active AMP kinase mutations cause glycogen storage disease mimicking hypertrophic cardiomyopathy

M Arad et al.

JOURNAL OF CLINICAL INVESTIGATION (2002)

Article Cell Biology

Asf1 links Rad53 to control of chromatin assembly

FH Hu et al.

GENES & DEVELOPMENT (2001)

Article Biochemistry & Molecular Biology

Yeast histone deposition protein Asf1p requires Hir proteins and PCNA for heterochromatic silencing

JA Sharp et al.

CURRENT BIOLOGY (2001)

Article Biochemistry & Molecular Biology

Dynamic interaction of DNA damage checkpoint protein Rad53 with chromatin assembly factor Asf1

A Emili et al.

MOLECULAR CELL (2001)

Article Multidisciplinary Sciences

Genome-wide location and function of DNA binding proteins

B Ren et al.

SCIENCE (2000)

Article Multidisciplinary Sciences

The language of covalent histone modifications

BD Strahl et al.

NATURE (2000)