4.8 Article

An Experimentally Tested Scenario for the Structural Evolution of Eukaryotic Cys2His2 Zinc Fingers from Eubacterial Ros Homologs

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Modeling Protein Evolution with Several Amino Acid Replacement Matrices Depending on Site Rates

Si Quang Le et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Article Biochemistry & Molecular Biology

HMMER web server: interactive sequence similarity searching

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biophysics

NMR assignments of the DNA binding domain of Ml4 protein from Mesorhizobium loti

Luigi Russo et al.

BIOMOLECULAR NMR ASSIGNMENTS (2010)

Article Biochemistry & Molecular Biology

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

Manolo Gouy et al.

MOLECULAR BIOLOGY AND EVOLUTION (2010)

Article Biochemical Research Methods

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

Nicolas Lartillot et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

The structural role of the zinc ion can be dispensable in prokaryotic zinc-finger domains

Ilaria Baglivo et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biochemical Research Methods

Empirical profile mixture models for phylogenetic reconstruction

Le Si Quang et al.

BIOINFORMATICS (2008)

Article Multidisciplinary Sciences

The prokaryotic Cys2His2 zinc-finger adopts a novel fold as revealed by the NMR structure of Agrobacterium tumefaciens Ros DNA-binding domain

Gaetano Malgieri et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemistry & Molecular Biology

A novel type of zinc finger DNA binding domain in the Agrobacterium tumefaciens transcriptional regulator Ros

Sabrina Esposito et al.

BIOCHEMISTRY (2006)

Article Biochemical Research Methods

BAli-Phy: simultaneous Bayesian inference of alignment and phylogeny

Marc A. Suchard et al.

BIOINFORMATICS (2006)

Review Biochemical Research Methods

Structural evolution of the protein kinase-like superfamily

ED Scheeff et al.

PLOS COMPUTATIONAL BIOLOGY (2005)

Article Biochemistry & Molecular Biology

WebLogo: A sequence logo generator

GE Crooks et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif

N Dathan et al.

NUCLEIC ACIDS RESEARCH (2002)

Review Biochemistry & Molecular Biology

Fold change in evolution of protein structures

NV Grishin

JOURNAL OF STRUCTURAL BIOLOGY (2001)

Article Multidisciplinary Sciences

Expressing the human genome

R Tupler et al.

NATURE (2001)

Article Biochemistry & Molecular Biology

Zinc finger proteins: new insights into structural and functional diversity

JH Laity et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2001)

Article Multidisciplinary Sciences

Arabidopsis transcription factors:: Genome-wide comparative analysis among eukaryotes

JL Riechmann et al.

SCIENCE (2000)

Letter Biochemistry & Molecular Biology

A mitochondrial origin for eukaryotic C2H2 zinc finger regulators?

D Moreira et al.

TRENDS IN MICROBIOLOGY (2000)

Article Biochemistry & Molecular Biology

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

J Castresana

MOLECULAR BIOLOGY AND EVOLUTION (2000)

Review Biochemistry & Molecular Biology

The origin of prokaryotic C2H2 zinc finger regulators

N Bouhouche et al.

TRENDS IN MICROBIOLOGY (2000)