相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The Enrichment of TATA Box and the Scarcity of Depleted Proximal Nucleosome in the Promoters of Duplicated Yeast Genes
Yuseob Kim et al.
JOURNAL OF MOLECULAR EVOLUTION (2010)
The evolution of gene duplications: classifying and distinguishing between models
Hideki Innan et al.
NATURE REVIEWS GENETICS (2010)
Ohnologs in the human genome are dosage balanced and frequently associated with disease
Takashi Makino et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Maintenance of duplicate genes and their functional redundancy by reduced expression
Wenfeng Qian et al.
TRENDS IN GENETICS (2010)
Expression pattern divergence of duplicated genes in rice
Zhe Li et al.
BMC BIOINFORMATICS (2009)
Uncovering Genetic Regulatory Network Divergence Between Duplicate Genes Using Yeast eQTL Landscape
Yangyun Zou et al.
JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION (2009)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Da Wei Huang et al.
NATURE PROTOCOLS (2009)
Duplicate genes increase expression diversity in closely related species and allopolyploids
Misook Ha et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Evolution of Stress-Regulated Gene Expression in Duplicate Genes of Arabidopsis thaliana
Cheng Zou et al.
PLOS GENETICS (2009)
Duplicate gene evolution and expression in the wake of vertebrate allopolyploidization
Frederic J. J. Chain et al.
BMC EVOLUTIONARY BIOLOGY (2008)
Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli
Kousuke Hanada et al.
PLANT PHYSIOLOGY (2008)
The limitations of ancestral state reconstruction and the evolution of the ascus in the Lecanorales (Lichenized ascomycota)
Stefan Ekman et al.
SYSTEMATIC BIOLOGY (2008)
Asymmetric histone modifications between the original and derived loci of human segmental duplications
Deyou Zheng
GENOME BIOLOGY (2008)
Preferential regulation of duplicated genes by microRNAs in mammals
Jingjing Li et al.
GENOME BIOLOGY (2008)
The role of Cis-Regulatory motifs and genetical control of expression in the divergence of yeast duplicate genes
Lindsey J. Leach et al.
MOLECULAR BIOLOGY AND EVOLUTION (2007)
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Genetic properties influencing the evolvability of gene expression
Christian R. Landry et al.
SCIENCE (2007)
The pattern and evolution of yeast promoter bendability
Itay Tirosh et al.
TRENDS IN GENETICS (2007)
External factors accelerate expression divergence between duplicate genes
Misook Ha et al.
TRENDS IN GENETICS (2007)
Functional analysis of gene duplications in Saccharomyces cerevisiae
Yuanfang Guan et al.
GENETICS (2007)
Family relationships: should consensus reign? - consensus clustering for protein families
Macha Nikolski et al.
BIOINFORMATICS (2007)
Multistate characters and diet shifts: Evolution of Erotylidae (Coleoptera)
Richard A. B. Leschen et al.
SYSTEMATIC BIOLOGY (2007)
Mapping uncertainty and phylogenetic uncertainty in ancestral character state reconstruction:: An example in the moss genus Brachytheciastrum
A. Vanderpoorten et al.
SYSTEMATIC BIOLOGY (2006)
Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice
Carene Rizzon et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
A genetic signature of interspecies variations in gene expression
Itay Tirosh et al.
NATURE GENETICS (2006)
Yeasts illustrate the molecular mechanisms of eukaryotic genome evolution
Bernard Dujon
TRENDS IN GENETICS (2006)
Role of selection in fixation of gene duplications
FA Kondrashov et al.
JOURNAL OF THEORETICAL BIOLOGY (2006)
Expression divergence between duplicate genes
WH Li et al.
TRENDS IN GENETICS (2005)
The Yeast Gene Order Browser: Combining curated homology and syntenic context reveals gene fate in polyploid species
KP Byrne et al.
GENOME RESEARCH (2005)
Modeling gene and genome duplications in eukaryotes
S Maere et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The evolutionary dynamics of plant duplicate genes
RC Moore et al.
CURRENT OPINION IN PLANT BIOLOGY (2005)
Rapid evolution of expression and regulatory divergences after yeast gene duplication
X Gu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The tricalbin C2 domains: Lipid-binding properties of a novel, synaptotagmin-like yeast protein family
TA Schulz et al.
BIOCHEMISTRY (2004)
Identification and distinct regulation of yeast TATA box-containing genes
AD Basehoar et al.
CELL (2004)
A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae
KL Huisinga et al.
MOLECULAR CELL (2004)
Divergence of spatial gene expression profiles following species-specific gene duplications in human and mouse
L Huminiecki et al.
GENOME RESEARCH (2004)
How much expression divergence after yeast gene duplication could be explained by regulatory motif evolution?
ZQ Zhang et al.
TRENDS IN GENETICS (2004)
Bayesian inference of character evolution
F Ronquist
TRENDS IN ECOLOGY & EVOLUTION (2004)
Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes
G Blanc et al.
PLANT CELL (2004)
A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications
FA Kondrashov et al.
TRENDS IN GENETICS (2004)
Duplicate genes increase gene expression diversity within and between species
ZL Gu et al.
NATURE GENETICS (2004)
Bayesian estimation of ancestral character states on phylogenies
M Pagel et al.
SYSTEMATIC BIOLOGY (2004)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
MrBayes 3: Bayesian phylogenetic inference under mixed models
F Ronquist et al.
BIOINFORMATICS (2003)
Evolution of cis-regulatory elements in duplicated genes of yeast
B Papp et al.
TRENDS IN GENETICS (2003)
Divergence in the spatial pattern of gene expression between human duplicate genes
KD Makova et al.
GENOME RESEARCH (2003)
A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome
G Blanc et al.
GENOME RESEARCH (2003)
Rapid divergence in expression between duplicate genes inferred from microarray data
ZL Gu et al.
TRENDS IN GENETICS (2002)
MRBAYES: Bayesian inference of phylogenetic trees
JP Huelsenbeck et al.
BIOINFORMATICS (2001)
Genomic expression programs in the response of yeast cells to environmental changes
AP Gasch et al.
MOLECULAR BIOLOGY OF THE CELL (2000)
T-Coffee: A novel method for fast and accurate multiple sequence alignment
C Notredame et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
Accommodating phylogenetic uncertainty in evolutionary studies
JP Huelsenbeck et al.
SCIENCE (2000)
Decoupled evolution of coding region and mRNA expression patterns after gene duplication: Implications for the neutralist-selectionist debate
A Wagner
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
ZH Yang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2000)