相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Developmental control of gene copy number by repression of replication initiation and fork progression
Noa Sher et al.
GENOME RESEARCH (2012)
Late-Replicating Domains Have Higher Divergence and Diversity in Drosophila melanogaster
Claudia C. Weber et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
Late Replication Domains in Polytene and Non-Polytene Cells of Drosophila melanogaster
Elena S. Belyaeva et al.
PLOS ONE (2012)
Open Sesame: activating dormant replication origins in the mouse immunoglobulin heavy chain (Igh) locus
James A. Borowiec et al.
CURRENT OPINION IN CELL BIOLOGY (2011)
GENETIC VARIATION AND DNA REPLICATION TIMING, OR WHY IS THERE LATE REPLICATING DNA?
John Herrick
EVOLUTION (2011)
Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription
Larry D. Mesner et al.
GENOME RESEARCH (2011)
Chromatin signatures of the Drosophila replication program
Matthew L. Eaton et al.
GENOME RESEARCH (2011)
Genome-scale analysis of metazoan replication origins reveals their organization in specific but flexible sites defined by conserved features
Christelle Cayrou et al.
GENOME RESEARCH (2011)
Genome-wide mapping of Arabidopsis thaliana origins of DNA replication and their associated epigenetic marks
Celina Costas et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)
Cdc45 Limits Replicon Usage from a Low Density of preRCs in Mammalian Cells
Philip G. Wong et al.
PLOS ONE (2011)
Synergic reprogramming of mammalian cells by combined exposure to mitotic Xenopus egg extracts and transcription factors
Olivier Ganier et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Replication Timing: A Fingerprint for Cell Identity and Pluripotency
Tyrone Ryba et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Evidence for Sequential and Increasing Activation of Replication Origins along Replication Timing Gradients in the Human Genome
Guillaume Guilbaud et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
Gene density profile reveals the marking of late replicated domains in the Drosophila melanogaster genome
Stepan N. Belyakin et al.
CHROMOSOMA (2010)
A winding road to origin discovery
Joyce L. Hamlin et al.
CHROMOSOME RESEARCH (2010)
Chk1-cyclin A/Cdk1 axis regulates origin firing programs in mammals
Makoto Nakanishi et al.
CHROMOSOME RESEARCH (2010)
Domain-wide regulation of DNA replication timing during mammalian development
Benjamin D. Pope et al.
CHROMOSOME RESEARCH (2010)
Programming DNA replication origins and chromosome organization
Christelle Cayrou et al.
CHROMOSOME RESEARCH (2010)
Developmental Control of Late Replication and S Phase Length
Antony W. Shermoen et al.
CURRENT BIOLOGY (2010)
Nucleotide supply, not local histone acetylation, sets replication origin usage in transcribed regions
Sophie Gay et al.
EMBO REPORTS (2010)
Conserved nucleosome positioning defines replication origins
Matthew L. Eaton et al.
GENES & DEVELOPMENT (2010)
Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis
Ichiro Hiratani et al.
GENOME RESEARCH (2010)
Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading
Heather K. MacAlpine et al.
GENOME RESEARCH (2010)
Heterochromatin protein 1 (HP1) modulates replication timing of the Drosophila genome
Michaela Schwaiger et al.
GENOME RESEARCH (2010)
Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes
Chun-Long Chen et al.
GENOME RESEARCH (2010)
Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
Tyrone Ryba et al.
GENOME RESEARCH (2010)
Cell fate transitions and the replication timing decision point
David M. Gilbert
JOURNAL OF CELL BIOLOGY (2010)
G2 phase chromatin lacks determinants of replication timing
Junjie Lu et al.
JOURNAL OF CELL BIOLOGY (2010)
Chk1 inhibits replication factory activation but allows dormant origin firing in existing factories
Xin Quan Ge et al.
JOURNAL OF CELL BIOLOGY (2010)
Genomic Study of Replication Initiation in Human Chromosomes Reveals the Influence of Transcription Regulation and Chromatin Structure on Origin Selection
Neerja Karnani et al.
MOLECULAR BIOLOGY OF THE CELL (2010)
Activation of the MCM2-7 Helicase by Association with Cdc45 and GINS Proteins
Ivar Ilves et al.
MOLECULAR CELL (2010)
Evaluating genome-scale approaches to eukaryotic DNA replication
David M. Gilbert
NATURE REVIEWS GENETICS (2010)
Eukaryotic DNA replication origins: many choices for appropriate answers
Marcel Mechali
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)
Sequencing newly replicated DNA reveals widespread plasticity in human replication timing
R. Scott Hansen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Genome-Wide Kinetics of Nucleosome Turnover Determined by Metabolic Labeling of Histones
Roger B. Deal et al.
SCIENCE (2010)
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE
Sushmita Roy et al.
SCIENCE (2010)
Organization of DNA Replication
Vadim O. Chagin et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2010)
Comparative Analysis of DNA Replication Timing Reveals Conserved Large-Scale Chromosomal Architecture
Eitan Yaffe et al.
PLOS GENETICS (2010)
S Phase Progression in Human Cells Is Dictated by the Genetic Continuity of DNA Foci
Apolinar Maya-Mendoza et al.
PLOS GENETICS (2010)
Epigenetically-Inherited Centromere and Neocentromere DNA Replicates Earliest in S-Phase
Amnon Koren et al.
PLOS GENETICS (2010)
Diversity of Eukaryotic DNA Replication Origins Revealed by Genome-Wide Analysis of Chromatin Structure
Nicolas M. Berbenetz et al.
PLOS GENETICS (2010)
Replicon Dynamics, Dormant Origin Firing, and Terminal Fork Integrity after Double-Strand Break Formation
Ylli Doksani et al.
CELL (2009)
Establishing the Program of Origin Firing during S Phase in Fission Yeast
Pei-Yun Jenny Wu et al.
CELL (2009)
Replication timing and transcriptional control: beyond cause and effect-part II
Lchiro Hiratani et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2009)
DNA replication as a target of the DNA damage checkpoint
Philip Zegerman et al.
DNA REPAIR (2009)
Replication timing as an epigenetic mark
Ichiro Hiratani et al.
EPIGENETICS (2009)
Histone acetyltransferase Hbo1: Catalytic activity, cellular abundance, and links to primary cancers
Masayoshi Iizuka et al.
GENE (2009)
Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome
Michaela Schwaiger et al.
GENES & DEVELOPMENT (2009)
Predictable dynamic program of timing of DNA replication in human cells
Romain Desprat et al.
GENOME RESEARCH (2009)
Implication of Checkpoint Kinase-dependent Up-regulation of Ribonucleotide Reductase R2 in DNA Damage Response
Yong-Wei Zhang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
Decreased replication origin activity in temporal transition regions
Zeqiang Guan et al.
JOURNAL OF CELL BIOLOGY (2009)
Interaction in vivo between the Two Matrix Attachment Regions Flanking a Single Chromatin Loop
Elvira R. Elvazova et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Shifts in Replication Timing Actively Affect Histone Acetylation during Nucleosome Reassembly
Laura Lande-Diner et al.
MOLECULAR CELL (2009)
The heterochromatin protein Swi6/HP1 activates replication origins at the pericentromeric region and silent mating-type locus
Makoto T. Hayashi et al.
NATURE CELL BIOLOGY (2009)
Cyclin A-Cdk1 regulates the origin firing program in mammalian cells
Yuko Katsuno et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Ubiquitin control of S phase: a new role for the ubiquitin conjugating enzyme, UbcH7
Elizabeth A. Whitcomb et al.
CELL DIVISION (2009)
Regulation of DNA replication by the S-phase DNA damage checkpoint
Nicholas Willis et al.
CELL DIVISION (2009)
Transcription Initiation Activity Sets Replication Origin Efficiency in Mammalian Cells
Joana Sequeira-Mendes et al.
PLOS GENETICS (2009)
Essential role of Chk1 in S phase progression through regulation of RNR2 expression
Hiromichi Naruyama et al.
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2008)
Chk1 is a histone H3 threonine 11 kinase that regulates DNA damage-induced transcriptional repression
Midori Shimada et al.
CELL (2008)
Global regulation of genome duplication in eukaryotes: an overview from the epifluorescence microscope
John Herrick et al.
CHROMOSOMA (2008)
Cdk1 and Cdk2 activity levels determine the efficiency of replication origin firing in Xenopus
Liliana Krasinska et al.
EMBO JOURNAL (2008)
HBO1 histone acetylase is a coactivator of the replication licensing factor Cdt1
Benoit Miotto et al.
GENES & DEVELOPMENT (2008)
DNA replication timing of the human β-globin domain is controlled by histone modification at the origin
Alon Goren et al.
GENES & DEVELOPMENT (2008)
The Temporal Program of Chromosome Replication: Genomewide Replication in clb5Δ Saccharomyces cerevisiae
Heather J. McCune et al.
GENETICS (2008)
Global organization of replication time zones of the mouse genome
Shlomit Farkash-Amar et al.
GENOME RESEARCH (2008)
A revisionist replicon model for higher eukaryotic genomes
J. L. Hamlin et al.
JOURNAL OF CELLULAR BIOCHEMISTRY (2008)
The Hsk1(Cdc7) Replication Kinase Regulates Origin Efficiency
Prasanta K. Patel et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
An ARS element inhibits DNA replication through a SIR2-Dependent mechanism
Amber Crampton et al.
MOLECULAR CELL (2008)
Replication fork movement sets chromatin loop size and origin choice in mammalian cells
Sylvain Courbet et al.
NATURE (2008)
Replication timing, chromosomal bands, and isochores
Maria Costantini et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Genome-wide studies highlight indirect links between human replication origins and gene regulation
Jean-Charles Cadoret et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication
Arkaitz Ibarra et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Global Reorganization of Replication Domains During Embryonic Stem Cell Differentiation
Ichiro Hiratani et al.
PLOS BIOLOGY (2008)
Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals
Yair Field et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
Dormant origins licensed by excess Mcm2-7 are required for human cells to survive replicative stress
Xin Quan Ge et al.
GENES & DEVELOPMENT (2007)
A high- resolution atlas of nucleosome occupancy in yeast
William Lee et al.
NATURE GENETICS (2007)
Replication in context: dynamic regulation of DNA replication patterns in metazoans
Mirit I. Aladjem
NATURE REVIEWS GENETICS (2007)
Replication fork velocities at adjacent replication origins are coordinately modified during DNA replication in human cells
Chiara Conti et al.
MOLECULAR BIOLOGY OF THE CELL (2007)
The ATR pathway: Fine-tuning the fork
Renee D. Paulsen et al.
DNA REPAIR (2007)
Developmental reprogramming after chromosome transfer into mitotic mouse zygotes
Dieter Egli et al.
NATURE (2007)
Chk1 regulates the density of active replication origins during the vertebrate S phase
Apolinar Maya-Mendoza et al.
EMBO JOURNAL (2007)
Genome-wide localization of pre-RC sites and identification of replication origins in fission yeast
Makoto Hayashi et al.
EMBO JOURNAL (2007)
Functional interactions of DNA topoisomerases with a human replication origin
Gulnara Abdurashidova et al.
EMBO JOURNAL (2007)
The impact of chromatin modifiers on the timing of locus replication in mouse embryonic stem cells
Helle F. Jorgensen et al.
GENOME BIOLOGY (2007)
Strength in numbers: preventing rereplication via multiple mechanisms in eukaryotic cells
Emily E. Arias et al.
GENES & DEVELOPMENT (2007)
DNA replication origin interference increases the spacing between initiation events in human cells
Ronald Lebofsky et al.
MOLECULAR BIOLOGY OF THE CELL (2006)
Genome-wide characterization of fission yeast DNA replication origins
Christian Heichinger et al.
EMBO JOURNAL (2006)
Evidence that the ATR/Chk1 pathway maintains normal replication fork progression during unperturbed S phase
Eva Petermann et al.
CELL CYCLE (2006)
Uncoupling global and fine-tuning replication timing determinants for mouse pericentric heterochromatin
Rong Wu et al.
JOURNAL OF CELL BIOLOGY (2006)
Differential binding of replication proteins across the human c-myc replicator
Maloy Ghosh et al.
MOLECULAR AND CELLULAR BIOLOGY (2006)
Excess Mcm2-7 license dormant origins of replication that can be used under conditions of replicative stress
Anna M. Woodward et al.
JOURNAL OF CELL BIOLOGY (2006)
Chk1 requirement for high global rates of replication fork progression during normal vertebrate S phase
E Petermann et al.
MOLECULAR AND CELLULAR BIOLOGY (2006)
Distinct mechanisms control the stability of the related S-phase cyclins Clb5 and Clb6
LP Jackson et al.
MOLECULAR AND CELLULAR BIOLOGY (2006)
DNA replication origins fire stochastically in fission yeast
PK Patel et al.
MOLECULAR BIOLOGY OF THE CELL (2006)
Replication of centromeric heterochromatin in mouse fibroblasts takes place in early, middle, and late S phase
S Weidtkamp-Peters et al.
HISTOCHEMISTRY AND CELL BIOLOGY (2006)
Mitotic remodeling of the replicon and chromosome structure
JM Lemaitre et al.
CELL (2005)
Nuclear matrix support of DNA replication
B Anachkova et al.
JOURNAL OF CELLULAR BIOCHEMISTRY (2005)
The DNA damage response during DNA replication
D Branzei et al.
CURRENT OPINION IN CELL BIOLOGY (2005)
Progressive activation of DNA replication initiation in large domains of the immunoglobulin heavy chain locus during B cell development
P Norio et al.
MOLECULAR CELL (2005)
Temporal profile of replication of human chromosomes
Y Jeon et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Inhibition of human Chk1 causes increased initiation of DNA replication, phosphorylation of ATR targets, and DNA breakage
RG Syljuåsen et al.
MOLECULAR AND CELLULAR BIOLOGY (2005)
Chromatin decondensation in S-phase involves recruitment of Cdk2 by Cdc45 and histone H1 phosphorylation
MG Alexandrow et al.
JOURNAL OF CELL BIOLOGY (2005)
DNA replication origins in the Schizosaccharomyces pombe genome
JL Dai et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding
D Remus et al.
EMBO JOURNAL (2004)
Replication timing of the human genome
K Woodfine et al.
HUMAN MOLECULAR GENETICS (2004)
Coordination of replication and transcription along a Drosophila chromosome
DM MacAlpine et al.
GENES & DEVELOPMENT (2004)
Chromatin regulates origin activity in Drosophila follicle cells
BD Aggarwal et al.
NATURE (2004)
Control of replication origin density and firing time in Xenopus egg extracts -: Role of a caffeine-sensitive, ATR-dependent checkpoint
K Marheineke et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
ATR and ATM regulate the timing of DNA replication origin firing
D Shechter et al.
NATURE CELL BIOLOGY (2004)
The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote
D Schübeler et al.
GENES & DEVELOPMENT (2004)
Stable chromosomal units determine the spatial and temporal organization of DNA replication
N Sadoni et al.
JOURNAL OF CELL SCIENCE (2004)
Enforcement of late replication origin firing by clusters of short G-rich DNA sequences
C Yompakdee et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Sequence-independent DNA binding and replication initiation by the human origin recognition complex
S Vashee et al.
GENES & DEVELOPMENT (2003)
The 'ORC cycle': a novel pathway for regulating eukaryotic DNA replication
ML DePamphilis
GENE (2003)
Regulation of cellular and SV40 virus origins of replication by Chk1-dependent intrinsic and UVC radiation-induced checkpoints
H Miao et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
A DNase I hypersensitive site flanks an origin of DNA replication and amplification in Sciara
FD Urnov et al.
CHROMOSOMA (2002)
DNA polymerase clamp shows little turnover at established replication sites but sequential de novo assembly at adjacent origin clusters
A Sporbert et al.
MOLECULAR CELL (2002)
Establishment of transcriptional competence in early and late S phase
JM Zhang et al.
NATURE (2002)
Histone acetylation regulates the time of replication origin firing
M Vogelauer et al.
MOLECULAR CELL (2002)
Genome-wide DNA replication profile for Drosophila melanogaster:: a link between transcription and replication timing
D Schübeler et al.
NATURE GENETICS (2002)
Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus
P Pasero et al.
GENES & DEVELOPMENT (2002)
Mapping of early firing origins on a replication profile of budding yeast
N Yabuki et al.
GENES TO CELLS (2002)
Replication dynamics of the yeast genome
MK Raghuraman et al.
SCIENCE (2001)
Aphidicolin triggers a block to replication origin firing in Xenopus egg extracts
K Marheineke et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
The positioning and dynamics of origins of replication in the budding yeast nucleus
P Heun et al.
JOURNAL OF CELL BIOLOGY (2001)
Functionally distinct, sequence-specific replicator and origin elements are required for Drosophila chorion gene amplification
L Lu et al.
GENES & DEVELOPMENT (2001)
Nucleosomes positioned by ORC facilitate the initiation of DNA replication
JR Lipford et al.
MOLECULAR CELL (2001)
Temporally coordinated assembly and disassembly of replication factories in the absence of DNA synthesis
DS Dimitrova et al.
NATURE CELL BIOLOGY (2000)
Long-distance control of origin choice and replication timing in the human β-globin locus are independent of the locus control region
DM Cimbora et al.
MOLECULAR AND CELLULAR BIOLOGY (2000)
Replication timing of the human X-inactivation center (XIC) region: correlation with chromosome bands
Y Watanabe et al.
GENE (2000)
Heterogeneity of eukaryotic replicons, replicon clusters, and replication foci
R Berezney et al.
CHROMOSOMA (2000)
Re-modelling of nuclear architecture in quiescent and senescent human fibroblasts
JM Bridger et al.
CURRENT BIOLOGY (2000)
分享论文
