4.7 Article

Champacyclin, a New Cyclic Octapeptide from Streptomyces Strain C42 Isolated from the Baltic Sea

期刊

MARINE DRUGS
卷 11, 期 12, 页码 4834-4857

出版社

MDPI
DOI: 10.3390/md11124834

关键词

Streptomyces champavatii; antimicrobial activity; fire blight; cyclic peptides; sequence ladder analysis; chiral GC-PCI; EI-MS; ESI-Ion-Trap-MSn; solid phase peptide synthesis (SPPS); on-resin cyclization; 2D NMR

资金

  1. BMBF program BIOKATALYSE
  2. Cluster of Excellence (Unifying concepts in catalysis-UniCat coordinated by TU Berlin, Germany)
  3. German Research Council (DFG)

向作者/读者索取更多资源

New isolates of Streptomyces champavatii were isolated from marine sediments of the Gotland Deep (Baltic Sea), from the Urania Basin (Eastern Mediterranean), and from the Kiel Bight (Baltic Sea). The isolates produced several oligopeptidic secondary metabolites, including the new octapeptide champacyclin (1a) present in all three strains. Herein, we report on the isolation, structure elucidation and determination of the absolute stereochemistry of this isoleucine/leucine (Ile/Leu = Xle) rich cyclic octapeptide champacyclin (1a). As 2D nuclear magnetic resonance (NMR) spectroscopy could not fully resolve the structure of (1a), additional information on sequence and configuration of stereocenters were obtained by a combination of multi stage mass spectrometry (MSn) studies, amino acid analysis, partial hydrolysis and subsequent enantiomer analytics with gas chromatography positive chmical ionization/electron impact mass spectrometry (GC-PCI/EI-MS) supported by comparison to reference dipeptides. Proof of the head-to-tail cyclization of (1a) was accomplished by solid phase peptide synthesis (SPPS) compared to an alternatively side chain cyclized derivative (2). Champacyclin (1a) is likely synthesized by a non-ribosomal peptide synthetase (NRPS), because of its high content of (d)-amino acids. The compound (1a) showed antimicrobial activity against the phytopathogen Erwinia amylovora causing the fire blight disease of certain plants.

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