相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Production of Biopharmaceuticals in E. coli: Current Scenario and Future Perspectives
Mohammed N. Baeshen et al.
JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY (2015)
Comparative analysis of the uropathogenic Escherichia coli surface proteome by tandem mass-spectrometry of artificially induced outer membrane vesicles
Daniel J. Wurpel et al.
JOURNAL OF PROTEOMICS (2015)
SecA-mediated targeting and translocation of secretory proteins
Katerina E. Chatzi et al.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2014)
Dynamic Interaction of the Sec Translocon with the Chaperone PpiD
Ilie Sachelaru et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
Regulation of cargo recognition, commitment, and unloading drives cotranslational protein targeting
Ishu Saraogi et al.
JOURNAL OF CELL BIOLOGY (2014)
Enhanced FASP (eFASP) to Increase Proteome Coverage and Sample Recovery for Quantitative Proteomic Experiments
Jonathan Erde et al.
JOURNAL OF PROTEOME RESEARCH (2014)
Multi-enzyme digestion FASP and the 'Total Protein Approach'-based absolute quantification of the Escherichia coli proteome
Jacek R. Wisniewski et al.
JOURNAL OF PROTEOMICS (2014)
Proteome-wide Subcellular Topologies of E. coli Polypeptides Database (STEPdb)
Georgia Orfanoudaki et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
The metabolic potential of Escherichia coli BL21 in defined and rich medium
Zhaopeng Li et al.
MICROBIAL CELL FACTORIES (2014)
Breaking on through to the other side: protein export through the bacterial Sec system
Katerina E. Chatzi et al.
BIOCHEMICAL JOURNAL (2013)
Multiple Envelope Stress Response Pathways Are Activated in an Escherichia coli Strain with Mutations in Two Members of the DedA Membrane Protein Family
Rakesh Sikdar et al.
JOURNAL OF BACTERIOLOGY (2013)
The Escherichia coli Peripheral Inner Membrane Proteome
Malvina Papanastasiou et al.
MOLECULAR & CELLULAR PROTEOMICS (2013)
Rapid and Deep Human Proteome Analysis by Single-dimension Shotgun Proteomics
Mohammad Pirmoradian et al.
MOLECULAR & CELLULAR PROTEOMICS (2013)
Quaternary Dynamics of the SecA Motor Drive Translocase Catalysis
Giorgos Gouridis et al.
MOLECULAR CELL (2013)
Membrane protein shaving with thermolysin can be used to evaluate topology predictors
Maria Bendz et al.
PROTEOMICS (2013)
Stress Relief during Host Infection: The Phage Shock Protein Response Supports Bacterial Virulence in Various Ways
Andrew J. Darwin
PLOS PATHOGENS (2013)
YqjD Is an Inner Membrane Protein Associated with Stationary-Phase Ribosomes in Escherichia coli
Hideji Yoshida et al.
JOURNAL OF BACTERIOLOGY (2012)
Comparative multi-omics systems analysis of Escherichia coli strains B and K-12
Sung Ho Yoon et al.
GENOME BIOLOGY (2012)
The Oligomeric State and Arrangement of the Active Bacterial Translocon
Karine Deville et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
Systematic Analysis of Native Membrane Protein Complexes in Escherichia coli
Gianluca Maddalo et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Overcoming Key Technological Challenges in Using Mass Spectrometry for Mapping Cell Surfaces in Tissues
Noelle M. Griffin et al.
MOLECULAR & CELLULAR PROTEOMICS (2011)
Ribosome-Dependent ATPase Interacts with Conserved Membrane Protein in Escherichia coli to Modulate Protein Synthesis and Oxidative Phosphorylation
Mohan Babu et al.
PLOS ONE (2011)
Current methodologies for proteomics of bacterial surface-exposed and cell envelope proteins
Nestor Solis et al.
PROTEOMICS (2011)
Genome-wide identification of the subcellular localization of the Escherichia coli B proteome using experimental and computational methods
Mee-Jung Han et al.
PROTEOMICS (2011)
Less label, more free: Approaches in label-free quantitative mass spectrometry
Karlie A. Neilson et al.
PROTEOMICS (2011)
On the beta-binomial model for analysis of spectral count data in label-free tandem mass spectrometry-based proteomics
Thang V. Pham et al.
BIOINFORMATICS (2010)
PpiD is a player in the network of periplasmic chaperones in Escherichia coli
Yvonne Matern et al.
BMC MICROBIOLOGY (2010)
Efficient Subfractionation of Gram-Negative Bacteria for Proteomics Studies
Marcus Thein et al.
JOURNAL OF PROTEOME RESEARCH (2010)
The IntAct molecular interaction database in 2010
B. Aranda et al.
NUCLEIC ACIDS RESEARCH (2010)
The Universal Protein Resource (UniProt) in 2010
Rolf Apweiler et al.
NUCLEIC ACIDS RESEARCH (2010)
Bacterial translation elongation factor EF-Tu interacts and colocalizes with actin-like MreB protein
Herve Joel Defeu Soufo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Quantifying E-coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
Yuichi Taniguchi et al.
SCIENCE (2010)
The Bacterial Cell Envelope
Thomas J. Silhavy et al.
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2010)
Managing membrane stress: the phage shock protein (Psp) response, from molecular mechanisms to physiology
Nicolas Joly et al.
FEMS MICROBIOLOGY REVIEWS (2010)
Membrane proteins and proteomics: Love is possible, but so difficult
Thierry Rabilloud
ELECTROPHORESIS (2009)
Identification of uropathogenic Escherichia coli surface proteins by shotgun proteomics
Matthew S. Walters et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2009)
Combination of FASP and StageTip-Based Fractionation Allows In-Depth Analysis of the Hippocampal Membrane Proteome
Jacek R. Wisniewski et al.
JOURNAL OF PROTEOME RESEARCH (2009)
EcoCyc: A comprehensive view of Escherichia coli biology
Ingrid M. Keseler et al.
NUCLEIC ACIDS RESEARCH (2009)
Comparative analysis of OFFGel, strong cation exchange with pH gradient, and RP at high pH for first-dimensional separation of peptides from a membrane-enriched protein fraction
Bruno Manadas et al.
PROTEOMICS (2009)
Exploring the inner membrane proteome of Escherichia coli: which proteins are eluding detection and why?
Andreas Bernsel et al.
TRENDS IN MICROBIOLOGY (2009)
Proteome-based identification of fusion partner for high-level extracellular production of recombinant proteins in Escherichia coli
Zhi-Gang Qian et al.
BIOTECHNOLOGY AND BIOENGINEERING (2008)
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama et al.
BMC GENOMICS (2008)
Assembly of the translocase motor onto the preprotein-conducting channel
Spyridoula Karamanou et al.
MOLECULAR MICROBIOLOGY (2008)
Small membrane proteins found by comparative genomics and ribosome binding site models
Matthew R. Hemm et al.
MOLECULAR MICROBIOLOGY (2008)
Repression of small toxic protein synthesis by the Sib and OhsC small RNAs
Elizabeth M. Fozo et al.
MOLECULAR MICROBIOLOGY (2008)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
Tuning Escherichia coli for membrane protein overexpression
Samuel Wagner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Comparison of the extracellular proteomes of Escherichia coli B and K-12 strains during high cell density cultivation
Xiao-Xia Xia et al.
PROTEOMICS (2008)
Bacterial protein secretion through the translocase nanomachine
Effrosyni Papanikou et al.
NATURE REVIEWS MICROBIOLOGY (2007)
Proteomics of integral membrane proteins-theory and application
Anna E. Speers et al.
CHEMICAL REVIEWS (2007)
Advantages of combined transmembrane topology and signal peptide prediction -: the Phobius web server
Lukas Kaell et al.
NUCLEIC ACIDS RESEARCH (2007)
Shotgun analysis of integral membrane proteins facilitated by elevated temperature
Anna E. Speers et al.
ANALYTICAL CHEMISTRY (2007)
Structure of dimeric SecA, the Escherichia coli preprotein translocase motor
Yannis Papanikolau et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Membrane proteome in Escherichia coli probed by MS3 mass spectrometry: a preliminary report
Claudia Cirulli et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2007)
Virus trafficking - learning from single-virus tracking
Boerries Brandenburg et al.
NATURE REVIEWS MICROBIOLOGY (2007)
Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae
Boris Zybailov et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Rationalizing membrane protein overexpression
Samuel Wagner et al.
TRENDS IN BIOTECHNOLOGY (2006)
The Escherichia coli proteome: Past, present, and future prospects
Mee-Jung Han et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2006)
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi et al.
MOLECULAR SYSTEMS BIOLOGY (2006)
Protein complexes of the Escherichia coli cell envelope
F Stenberg et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
Y Ishihama et al.
MOLECULAR & CELLULAR PROTEOMICS (2005)
Detection and identification of stable oligomeric protein complexes in Escherichi coli inner membranes -: A proteomics approach
REJ Spelbrink et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Hiding behind hydrophobicity -: Transmembrane segments in mass spectrometry
LA Eichacker et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
X-ray structure of a protein-conducting channel
B van den Berg et al.
NATURE (2004)
A combined transmembrane topology and signal peptide prediction method
L Käll et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
A method for the comprehensive proteomic analysis of membrane proteins
CC Wu et al.
NATURE BIOTECHNOLOGY (2003)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Protein fractionation in a multicompartment device using Off-Gel (TM) isoelectric focusing
PE Michel et al.
ELECTROPHORESIS (2003)
Large-scale proteomic analysis of the human splicesome
J Rappsilber et al.
GENOME RESEARCH (2002)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Membrane topology of the N-terminus of the Escherichia coli FtsK division protein
R Dorazi et al.
FEBS LETTERS (2000)