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GENOTYPIC ANALYSIS OF MUCOR FROM THE PLATYPUS IN AUSTRALIA

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JOURNAL OF WILDLIFE DISEASES
卷 46, 期 1, 页码 55-69

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WILDLIFE DISEASE ASSOC, INC
DOI: 10.7589/0090-3558-46.1.55

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Intersimple sequence repeat (ISSR) analysis; ITS sequencing; Mucor amphibiorum; Mucor; mucormyocosis; Ornithorhynchus anatinus; PCR

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Mucor amphibiorum is the only pathogen known to cause significant morbidity and mortality in the free-living platypus (cnithorhynchus anatinus) in Tasmania. Infection has also been reported in free-ranging cane toads (Bufo marinus) and green tree frogs (Litoria caerulea) from mainland Australia but has not been confirmed in platypuses from the mainland. To date, there has been little genotyping specifically conducted on M. amphibiorum. A collection of 21 Mucor isolaes representing isolates from the platypus, frogs and toads, and environmental samples were obtained for genotypic analysis. Internal transcribed spacer (ITS) region sequencing and GenBank comparision confirmed the identify of most of the isolates. Representative isolates from infected platypuses formed a clade containing the reference isolates of M. amphibiorum from the Centraal Bureau voor Schimmelcultures repository. The M. amphibiorum isolates showed a close sequence identify with Mucor indicus and consisted of two haplotypes, differentiated b y singlel 4049, all isolates from platypuses were in one haplotypes. Multilocus finterprinting via the use of intersimple sequence repeats polymerase chain reaction identified 19 genotypes. Two major clusters were evident: 1) M. amphibiorum and Mucor racemosus; and 2) Mucor circinelloides, Mucor ramosissimus, and Mucor fragilis. Seven M. amphibiorum isolates from platypuses were present in two subclusters, with isolate 96-4053 appearing genetically distinct from all other isolates. Isolates classified as M. circinelloides by sequence analysis formed a separate subcluster, distinct from other Mucor spp. The combination of sequencing and multilocus fingerprinting has the potential to provide the tools for rapid identification of M. amphibiorum. Data presented on will provide critical information for its management in Tasmanian river systems.

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