期刊
JOURNAL OF THROMBOSIS AND HAEMOSTASIS
卷 11, 期 6, 页码 1103-1110出版社
WILEY
DOI: 10.1111/jth.12205
关键词
chromosome breakpoints; chromosome deletion; DNA copy number variations; DNA end-joining repair; hemophilia A
资金
- National Basic Research Program of China [2013CB966800]
- Ministry of Health [201202017]
BackgroundLarge deletions in the F8 gene are responsible for approximately 3% of severe hemophilia A (HA) cases. However, only a few breakpoints in large deletions have been characterized. ObjectivesTo identify large deletions in the F8 gene and to characterize the molecular mechanisms leading to these deletions. Patients and methodsWe used AccuCopy technology, a copy number variation (CNV) genotyping method based on multiplex competitive amplification, to confirm deletions in index patients and to screen potential female carriers in 10 HA families. Also, breakpoints of these large deletions were characterized by a primer walking strategy and genome walking technique. ResultsTen large deletions and four female carriers were identified by AccuCopy. The extents of deleted regions ranged from 1.3 to 68.5kb. Exact breakpoints of these deletions were successfully characterized. Eight of them presented microhomologies at breakpoint junctions and several recombination-associated elements (repetitive elements, non-B conformation forming motifs and sequence motifs) were also observed in close proximity to the junctions. ConclusionsAccuCopy technology is a reliable and efficient tool for detecting large deletions in the F8 gene and identifying HA female carriers. The genome walking technique is a highly specific, efficient and versatile method for characterizing the deletion breakpoints. Molecular characterization of deletion breakpoints revealed that non-homologous end joining and microhomology-mediated replication-dependent recombination were the major causative mechanisms of the 10 large deletions in the F8 gene.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据