4.6 Article

Finite Element Approximation to a Finite-Size Modified Poisson-Boltzmann Equation

期刊

JOURNAL OF SCIENTIFIC COMPUTING
卷 47, 期 3, 页码 347-364

出版社

SPRINGER/PLENUM PUBLISHERS
DOI: 10.1007/s10915-010-9441-7

关键词

Finite elements; Poisson-Boltzmann; Poisson-Bikerman

资金

  1. University of Illinois
  2. NSF-CCF [08-30578]
  3. NSF-DMS [07-46676]
  4. Division of Computing and Communication Foundations
  5. Direct For Computer & Info Scie & Enginr [0830582] Funding Source: National Science Foundation
  6. Division Of Mathematical Sciences
  7. Direct For Mathematical & Physical Scien [0746676] Funding Source: National Science Foundation

向作者/读者索取更多资源

The inclusion of steric effects is important when determining the electrostatic potential near a solute surface. We consider a modified form of the Poisson-Boltzmann equation, often called the Poisson-Bikerman equation, in order to model these effects. The modifications lead to bounded ionic concentration profiles and are consistent with the Poisson-Boltzmann equation in the limit of zero-size ions. Moreover, the modified equation fits well into existing finite element frameworks for the Poisson-Boltzmann equation. In this paper, we advocate a wider use of the modified equation and establish well-posedness of the weak problem along with convergence of an associated finite element formulation. We also examine several practical considerations such as conditioning of the linearized form of the nonlinear modified Poisson-Boltzmann equation, implications in numerical evaluation of the modified form, and utility of the modified equation in the context of the classical Poisson-Boltzmann equation.

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