期刊
JOURNAL OF PROTEOME RESEARCH
卷 9, 期 2, 页码 1020-1031出版社
AMER CHEMICAL SOC
DOI: 10.1021/pr9009172
关键词
tissue interstitial fluid; liver; proteomics; biomarker; plasma; hepatocellular carcinoma
资金
- Chinese State High-tech Program [2006AA02A308]
- Chinese State Key Projects for Basic Research [2006CB910401, 2006CB910801, 2006CB910600, 2010CB912700, 2006CB503910]
- National Natural Science Foundation of China [30700988, 30700356, 30972909]
- Chinese State Key Project Specialized for Infectious Diseases [2008ZX10002-016, 2009ZX10004-103, 2009ZX09301-002]
- International Scientific Collaboration Program [2009DFB33070, 2008GR0763]
- State Key Laboratory of Proteomics [SKLP-K200805]
Tissue interstitial fluid (TIF) forms the interface between circulating body fluids and intracellular fluid. Pathological alterations of liver cells could be reflected in TIF, making it a promising source of liver disease biomarkers, Mouse liver TIF was extracted, separated by SDS-PAGE, analyzed by linear ion trap mass spectrometer, and 1450 proteins were identified. These proteins may be secreted, shed from membrane vesicles, or represent cellular breakdown products. They show different profiling patterns, quantities, and possibly modification/cleavage of intracellular proteins. The high solubility and even distribution of liver TIF supports its suitability for proteome analysis. Comparison of mouse liver TIF data with liver tissue and plasma proteome data identified major proteins that might be released from liver to plasma and serve as blood biomarkers of liver origin. This result was partially supported by comparison of human liver TIF data with human liver and plasma proteome data. Paired TIFs from tumor and nontumor liver tissues of a hepatocellular carcinoma patient were analyzed and the profile of subtracted differential proteins supports the potential for biomarker discovery in TIF. This study is the first analysis of the liver TIF proteome and provides a foundation for further application of TIF in liver disease biomarker discovery.
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