相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Next-generation sequencing technologies for gene expression profiling in plants
Mukesh Jain
BRIEFINGS IN FUNCTIONAL GENOMICS (2012)
RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles
Kil Hyun Kim et al.
DNA RESEARCH (2011)
Digital gene expression for non-model organisms
Lewis Z. Hong et al.
GENOME RESEARCH (2011)
Functions and Application of the AP2/ERF Transcription Factor Family in Crop Improvement
Zhao-Shi Xu et al.
JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2011)
PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database
He Zhang et al.
NUCLEIC ACIDS RESEARCH (2011)
Genome-wide atlas of transcription during maize development
Rajandeep S. Sekhon et al.
PLANT JOURNAL (2011)
Duplicate Maize Wrinkled1 Transcription Factors Activate Target Genes Involved in Seed Oil Biosynthesis
Benjamin Pouvreau et al.
PLANT PHYSIOLOGY (2011)
Overexpression of transcription factor ZmPTF1 improves low phosphate tolerance of maize by regulating carbon metabolism and root growth
Zhaoxia Li et al.
PLANTA (2011)
grassy tillers1 promotes apical dominance in maize and responds to shade signals in the grasses
Clinton J. Whipple et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm
Mei Zhang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Utility of RNA Sequencing for Analysis of Maize Reproductive Transcriptomes
Rebecca M. Davidson et al.
PLANT GENOME (2011)
DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
Likun Wang et al.
BIOINFORMATICS (2010)
Tissue Culture-Induced Novel Epialleles of a Myb Transcription Factor Encoded by pericarp color1 in Maize
Yong Rhee et al.
GENETICS (2010)
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
Sergei A. Filichkin et al.
GENOME RESEARCH (2010)
Genome-Wide Analysis of WOX Gene Family in Rice, Sorghum, Maize, Arabidopsis and Poplar
Xin Zhang et al.
JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2010)
SQUAMOSA Promoter-Binding Protein-Like Transcription Factors: Star Players for Plant Growth and Development
Xiaobo Chen et al.
JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2010)
The developmental dynamics of the maize leaf transcriptome
Pinghua Li et al.
NATURE GENETICS (2010)
PInTFDB: updated content and new features of the plant transcription factor database
Paulino Perez-Rodriguez et al.
NUCLEIC ACIDS RESEARCH (2010)
Digital Gene Expression Signatures for Maize Development
Andrea L. Eveland et al.
PLANT PHYSIOLOGY (2010)
The developmental expression dynamics of Drosophila melanogaster transcription factors
Boris Adryan et al.
GENOME BIOLOGY (2010)
Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses
Melissa J. Fullwood et al.
GENOME RESEARCH (2009)
Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA
Yan Fu et al.
GENOME RESEARCH (2009)
Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize
Xiangfeng Wang et al.
PLANT CELL (2009)
bearded-ear Encodes a MADS Box Transcription Factor Critical for Maize Floral Development
Beth E. Thompson et al.
PLANT CELL (2009)
The HD-ZIP IV transcription factor OCL4 is necessary for trichome patterning and anther development in maize
Vanessa Vernoud et al.
PLANT JOURNAL (2009)
Sequencing, Mapping, and Analysis of 27,455 Maize Full-Length cDNAs
Carol Soderlund et al.
PLOS GENETICS (2009)
Loss of RNA-Dependent RNA Polymerase 2 (RDR2) Function Causes Widespread and Unexpected Changes in the Expression of Transposons, Genes, and 24-nt Small RNAs
Yi Jia et al.
PLOS GENETICS (2009)
Highly integrated single-base resolution maps of the epigenome in Arabidopsis
Ryan Lister et al.
CELL (2008)
The magic of the hypoxia-signaling cascade
E. Benizri et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2008)
New insights into the mechanism of heat shock response activation
I. Shamovsky et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2008)
RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
John C. Marioni et al.
GENOME RESEARCH (2008)
Isolation and characterization of a C-repeat binding transcription factor from maize
Lei Wang et al.
JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2008)
Alternative isoform regulation in human tissue transcriptomes
Eric T. Wang et al.
NATURE (2008)
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
Brian T. Wilhelm et al.
NATURE (2008)
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
Qun Pan et al.
NATURE GENETICS (2008)
Mapping and quantifying mammalian transcriptomes by RNA-Seq
Ali Mortazavi et al.
NATURE METHODS (2008)
The milkweed pod1 gene encodes a KANADI protein that is required for abaxial/adaxial patterning in maize leaves
Hector Candela et al.
PLANT CELL (2008)
The maize Dof protein PBF activates transcription of γ-zein during maize seed development
Pau Marzabal et al.
PLANT MOLECULAR BIOLOGY (2008)
Structures and evolutionary origins of plant-specific transcription factor DNA-binding domains
Kazuhiko Yamasaki et al.
PLANT PHYSIOLOGY AND BIOCHEMISTRY (2008)
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
Marc Sultan et al.
SCIENCE (2008)
Genome-wide gene expression profiling reveals conserved and novel molecular functions of the stigma in rice1[W]
Meina Li et al.
PLANT PHYSIOLOGY (2007)
Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus m maize
Silvio Salvi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
The maize (Zea mays L.) RTCS gene encodes a LOB domain protein that is a key regulator of embryonic seminal and post-embryonic shoot-borne root initiation
Graziana Taramino et al.
PLANT JOURNAL (2007)
PlnTFDB:: an integrative plant transcription factor database
Diego Mauricio Riano-Pachon et al.
BMC BIOINFORMATICS (2007)
Gene discovery and annotation using LCM-454 transcriptome sequencing
Scott J. Emrich et al.
GENOME RESEARCH (2007)
DRTF: a database of rice transcription factors
G Gao et al.
BIOINFORMATICS (2006)
ramosa2 encodes a LATERAL ORGAN BOUNDARY domain protein that determines the fate of stem cells in branch meristems of maize
E Bortiri et al.
PLANT CELL (2006)
The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae
Miguel C. Teixeira et al.
NUCLEIC ACIDS RESEARCH (2006)
Isolation and functional characterisation of two new bZIP maize regulators of the ABA responsive gene rab28
C Nieva et al.
PLANT MOLECULAR BIOLOGY (2005)
DATF:: a database of Arabidopsis transcription factors
AY Guo et al.
BIOINFORMATICS (2005)
Promoter features related to tissue specificity as measured by Shannon entropy
J Schug et al.
GENOME BIOLOGY (2005)
A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks
John S. Reece-Hoyes et al.
GENOME BIOLOGY (2005)
Maintaining cholesterol homeostasis: Sterol regulatory element-binding proteins
Lutz W. Weber et al.
WORLD JOURNAL OF GASTROENTEROLOGY (2004)
Spatial and temporal tracing of vessel differentiation in young Arabidopsis seedlings by the expression of an immature tracheary element-specific promoter
H Pyo et al.
PLANT AND CELL PHYSIOLOGY (2004)
Transcriptional regulation of secondary metabolism
KM Davies et al.
FUNCTIONAL PLANT BIOLOGY (2003)
The role of CCA1 and LHY in the plant circadian clock
RM Green et al.
DEVELOPMENTAL CELL (2002)
Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis
D Alabadí et al.
CURRENT BIOLOGY (2002)
Arabidopsis transcription factors:: Genome-wide comparative analysis among eukaryotes
JL Riechmann et al.
SCIENCE (2000)
A genomic perspective on plant transcription factors
JL Riechmann et al.
CURRENT OPINION IN PLANT BIOLOGY (2000)
Comparative genomics of the eukaryotes
GM Rubin et al.
SCIENCE (2000)
分享论文
