相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Upper-limit mutation rate estimation for a plant RNA virus
Rafael Sanjuan et al.
BIOLOGY LETTERS (2009)
Validation of high rates of nucleotide substitution in geminiviruses: phylogenetic evidence from East African cassava mosaic viruses
Siobain Duffy et al.
JOURNAL OF GENERAL VIROLOGY (2009)
The Multiplicity of Infection of a Plant Virus Varies during Colonization of Its Eukaryotic Host
Pablo Gonzalez-Jara et al.
JOURNAL OF VIROLOGY (2009)
Hantavirus Evolution in Relation to Its Rodent and Insectivore Hosts: No Evidence for Codivergence
Cadhla Ramsden et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
Evolutionary Insights from a Genetically Divergent Hantavirus Harbored by the European Common Mole (Talpa europaea)
Hae Ji Kang et al.
PLOS ONE (2009)
Macroevolution of Complex Retroviruses
Aris Katzourakis et al.
SCIENCE (2009)
Time Dependency of Molecular Rates in Ancient DNA Data Sets, A Sampling Artifact?
Regis Debruyne et al.
SYSTEMATIC BIOLOGY (2009)
Small effective population sizes and rare nonsynonymous variants in potyviruses
Austin L. Hughes
VIROLOGY (2009)
Experimental evidence indicating that mastreviruses probably did not co-diverge with their hosts
Gordon W. Harkins et al.
VIROLOGY JOURNAL (2009)
Non-cultivated plants of the Tallgrass Prairie Preserve of northeastern Oklahoma frequently contain virus-like sequences in particulate fractions
Vijay Muthukumar et al.
VIRUS RESEARCH (2009)
Plant virus emergence and evolution: Origins, new encounter scenarios, factors driving emergence, effects of changing world conditions, and prospects for control
Roger A. C. Jones
VIRUS RESEARCH (2009)
Dating the Age of the SIV Lineages That Gave Rise to HIV-1 and HIV-2
Joel O. Wertheim et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Origin and Early Evolution of Angiosperms
Douglas E. Solds et al.
YEAR IN EVOLUTIONARY BIOLOGY 2008 (2008)
The Origins of Plant Pathogens in Agro-Ecosystems
Eva H. Stukenbrock et al.
Annual Review of Phytopathology (2008)
The bean common mosaic virus lineage of potyviruses: where did it arise and when?
A. J. Gibbs et al.
ARCHIVES OF VIROLOGY (2008)
Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution
Maxim Y. Wolf et al.
BIOLOGY DIRECT (2008)
Assessment of codivergence of Mastreviruses with their plant hosts
Beilei Wu et al.
BMC EVOLUTIONARY BIOLOGY (2008)
Rapid evolutionary dynamics of zucchini yellow mosaic virus
Heather E. Simmons et al.
JOURNAL OF GENERAL VIROLOGY (2008)
SWeBLAST: A sliding window web-based BLAST tool for recombinant analysis
Mathieu Fourment et al.
JOURNAL OF VIROLOGICAL METHODS (2008)
Estimation of the Effective Number of Founders That Initiate an Infection after Aphid Transmission of a Multipartite Plant Virus
Monica Betancourt et al.
JOURNAL OF VIROLOGY (2008)
Rice Yellow Mottle Virus, an RNA plant virus, evolves as rapidly as most RNA animal viruses
D. Fargette et al.
JOURNAL OF VIROLOGY (2008)
High rates of molecular evolution in hantaviruses
Cadhla Ramsden et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Papaya ringspot virus-P:: characteristics, pathogenicity, sequence variability and control
Savarni Tripathi et al.
MOLECULAR PLANT PATHOLOGY (2008)
The Big Bang of picorna-like virus evolution antedates the radiation of eukaryotic supergroups
Eugene V. Koonin et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Accumulating Variation at Conserved Sites in Potyvirus Genomes Is Driven by Species Discovery and Affects Degenerate Primer Design
Linda Zheng et al.
PLOS ONE (2008)
The Prehistory of Potyviruses: Their Initial Radiation Was during the Dawn of Agriculture
Adrian J. Gibbs et al.
PLOS ONE (2008)
Modelling heterotachy in phylogenetic inference by reversible-jump Markov chain Monte Carlo
Mark Pagel et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)
A transitional endogenous lentivirus from the genome of a basal primate and implications for lentivirus evolution
Robert J. Gifford et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
A novel test for host-symbiont codivergence indicates ancient origin of fungal endophytes in grasses
C. L. Schardl et al.
SYSTEMATIC BIOLOGY (2008)
Experimental observations of rapid Maize streak virus evolution reveal a strand-specific nucleotide substitution bias
Eric van der Walt et al.
VIROLOGY JOURNAL (2008)
Diversification of Rice yellow mottle virus and related viruses spans the history of agriculture from the Neolithic to the present
Denis Fargette et al.
PLOS PATHOGENS (2008)
Phylogenetic evidence for rapid rates of molecular evolution in the single-stranded DNA begomovirus Tomato yellow leaf curl virus
Siobain Duffy et al.
JOURNAL OF VIROLOGY (2008)
Distribution of fitness and virulence effects caused by single-nucleotide substitutions in tobacco etch virus
Purificacion Carrasco et al.
JOURNAL OF VIROLOGY (2007)
Estimation of the number of virus particles transmitted by an insect vector
Benoit Moury et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
The complex history of the domestication of rice
Megan Sweeney et al.
ANNALS OF BOTANY (2007)
High-frequency reversion of geminivirus replication protein mutants during infection
Gerardo Arguello-Astorga et al.
JOURNAL OF VIROLOGY (2007)
Genetic structure and population variability of tomato yellow leaf curl China virus
Linmei Ge et al.
JOURNAL OF VIROLOGY (2007)
Origins of major human infectious diseases
Nathan D. Wolfe et al.
NATURE (2007)
Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution
Oliver G. Pybus et al.
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Vector-Virus Mutualism Accelerates Population Increase of an Invasive Whitefly
Min Jiu et al.
PLOS ONE (2007)
Evidence for time dependency of molecular rate estimates
Simon Y. W. Ho et al.
SYSTEMATIC BIOLOGY (2007)
The variable codons of H3 influenza A virus haemagglutinin genes
M. J. Gibbs et al.
ARCHIVES OF VIROLOGY (2007)
Family specific rates of protein evolution
H Luz et al.
BIOINFORMATICS (2006)
Evolution of complexity in the viral world: The dawn of a new vision
EV Koonin et al.
VIRUS RESEARCH (2006)
PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change
M Fourment et al.
BMC EVOLUTIONARY BIOLOGY (2006)
Long-term genome diploidization in allopolyploid Nicotiana section Repandae (Solanaceae)
JJ Clarkson et al.
NEW PHYTOLOGIST (2005)
Time dependency of molecular rate estimates and systematic overestimation of recent divergence times
SYW Ho et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
RDP2: recombination detection and analysis from sequence alignments
DP Martin et al.
BIOINFORMATICS (2005)
The origin and evolution of geminivirus-related DNA sequences in Nicotiana
L Murad et al.
HEREDITY (2004)
Phylogenetic relationships in Nicotiana (Solanaceae) inferred from multiple plastid DNA regions
JJ Clarkson et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2004)
Influenza as a model system for studying the cross-species transfer and evolution of the SARS coronavirus
RM Bush
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2004)
Mapping the antigenic and genetic evolution of influenza virus
DJ Smith et al.
SCIENCE (2004)
Spontaneous mutant frequency and mutation spectrum for gene A of Phi X174 grown in E-coli
JL Raney et al.
ENVIRONMENTAL AND MOLECULAR MUTAGENESIS (2004)
The contribution of epistasis to the architecture of fitness in an RNA virus
R Sanjuán et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
A large variation in the rates of synonymous substitution for RNA viruses and its relationship to a diversity of viral infection and transmission modes
K Hanada et al.
MOLECULAR BIOLOGY AND EVOLUTION (2004)
Variation and evolution of plant virus populations
F García-Arenal et al.
INTERNATIONAL MICROBIOLOGY (2003)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
Estimation of population bottlenecks during systemic movement of Tobacco mosaic virus in tobacco plants
S Sacristán et al.
JOURNAL OF VIROLOGY (2003)
Evolution of wheat streak mosaic virus: Dynamics of population growth within plants may explain limited variation
R French et al.
ANNUAL REVIEW OF PHYTOPATHOLOGY (2003)
Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis
GM Jenkins et al.
JOURNAL OF MOLECULAR EVOLUTION (2002)
Effects of passage history and sampling bias on phylogenetic reconstruction of human influenza A evolution
RM Bush et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)