相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Classification and Comparison of Small RNAs from Plants
Michael J. Axtell
ANNUAL REVIEW OF PLANT BIOLOGY, VOL 64 (2013)
Gene regulation by the act of long non-coding RNA transcription
Aleksandra E. Kornienko et al.
BMC BIOLOGY (2013)
Identification of drought-responsive and novel Populus trichocarpa microRNAs by high-throughput sequencing and their targets using degradome analysis
Peng Shuai et al.
BMC GENOMICS (2013)
Potential roles of microRNAs in regulating long intergenic noncoding RNAs
Liran Juan et al.
BMC MEDICAL GENOMICS (2013)
Natural RNA circles function as efficient microRNA sponges
Thomas B. Hansen et al.
NATURE (2013)
Populus euphratica: the transcriptomic response to drought stress
Sha Tang et al.
PLANT MOLECULAR BIOLOGY (2013)
GmNFYA3, a target gene of miR169, is a positive regulator of plant tolerance to drought stress
Zhiyong Ni et al.
PLANT MOLECULAR BIOLOGY (2013)
Global identification of miRNAs and targets in Populus euphratica under salt stress
Bosheng Li et al.
PLANT MOLECULAR BIOLOGY (2013)
Widespread Long Noncoding RNAs as Endogenous Target Mimics for MicroRNAs in Plants
Hua-Jun Wu et al.
PLANT PHYSIOLOGY (2013)
Human Disease-Associated Genetic Variation Impacts Large Intergenic Non-Coding RNA Expression
Vinod Kumar et al.
PLOS GENETICS (2013)
Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs
Matthew J. Hangauer et al.
PLOS GENETICS (2013)
Target mimics: an embedded layer of microRNA-involved gene regulatory networks in plants
Yijun Meng et al.
BMC GENOMICS (2012)
Identification and Properties of 1,119 Candidate LincRNA Loci in the Drosophila melanogaster Genome
Robert S. Young et al.
GENOME BIOLOGY AND EVOLUTION (2012)
Identification of long non-protein coding RNAs in chicken skeletal muscle using next generation sequencing
Tingting Li et al.
GENOMICS (2012)
Effective Small RNA Destruction by the Expression of a Short Tandem Target Mimic in Arabidopsis
Jun Yan et al.
PLANT CELL (2012)
Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis
Jun Liu et al.
PLANT CELL (2012)
Computational Identification and Functional Predictions of Long Noncoding RNA in Zea mays
Susan Boerner et al.
PLOS ONE (2012)
A novel hypoxic stress-responsive long non-coding RNA transcribed by RNA polymerase III in Arabidopsis
Juan Wu et al.
RNA BIOLOGY (2012)
Long noncoding RNA: unveiling hidden layer of gene regulatory networks
Eun-Deok Kim et al.
TRENDS IN PLANT SCIENCE (2012)
Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and SBS sequencing
Mingming Xin et al.
BMC PLANT BIOLOGY (2011)
Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
Igor Ulitsky et al.
CELL (2011)
No-Nonsense Functions for Long Noncoding RNAs
Takashi Nagano et al.
CELL (2011)
Genome-wide responses to drought in forest trees
Erin T. Hamanishi et al.
FORESTRY (2011)
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
Moran N. Cabili et al.
GENES & DEVELOPMENT (2011)
Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica
Bosheng Li et al.
JOURNAL OF EXPERIMENTAL BOTANY (2011)
lincRNAs act in the circuitry controlling pluripotency and differentiation
Mitchell Guttman et al.
NATURE (2011)
miRBase: integrating microRNA annotation and deep-sequencing data
Ana Kozomara et al.
NUCLEIC ACIDS RESEARCH (2011)
psRNATarget: a plant small RNA target analysis server
Xinbin Dai et al.
NUCLEIC ACIDS RESEARCH (2011)
Decoding the function of nuclear long non-coding RNAs
Ling-Ling Chen et al.
CURRENT OPINION IN CELL BIOLOGY (2010)
A global overview of drought and heat-induced tree mortality reveals emerging climate change risks for forests
Craig D. Allen et al.
FOREST ECOLOGY AND MANAGEMENT (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
Mitchell Guttman et al.
NATURE BIOTECHNOLOGY (2010)
LincRNAs join the pluripotency alliance
Jia-Hui Ng et al.
NATURE GENETICS (2010)
Genome-wide computational identification and manual annotation of human long noncoding RNA genes
Hui Jia et al.
RNA (2010)
A Collection of Target Mimics for Comprehensive Analysis of MicroRNA Function in Arabidopsis thaliana
Marco Todesco et al.
PLOS GENETICS (2010)
SOAP2: an improved ultrafast tool for short read alignment
Ruiqiang Li et al.
BIOINFORMATICS (2009)
RepPop: a database for repetitive elements in Populus trichocarpa
Fengfeng Zhou et al.
BMC GENOMICS (2009)
Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses
Besma Ben Amor et al.
GENOME RESEARCH (2009)
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
Ahmad M. Khalil et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast
Stacie L. Bumgarner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Target mimicry provides a new mechanism for regulation of microRNA activity
Jose Manuel Franco-Zorrilla et al.
NATURE GENETICS (2007)
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
Lei Kong et al.
NUCLEIC ACIDS RESEARCH (2007)
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
G. A. Tuskan et al.
SCIENCE (2006)
OrfPredictor: predicting protein-coding regions in EST-derived sequences
XJ Min et al.
NUCLEIC ACIDS RESEARCH (2005)
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
Y Okazaki et al.
NATURE (2002)
Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method
KJ Livak et al.
METHODS (2001)
POWER_SAGE: comparing statistical tests for SAGE experiments
MZ Man et al.
BIOINFORMATICS (2000)
Codon usage tabulated from international DNA sequence databases: status for the year 2000
Y Nakamura et al.
NUCLEIC ACIDS RESEARCH (2000)