4.4 Article

Limiting assumptions in molecular modeling: electrostatics

期刊

JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
卷 27, 期 2, 页码 107-114

出版社

SPRINGER
DOI: 10.1007/s10822-013-9634-x

关键词

Electrostatics; Multipole; Dipole; Quadrupole; Polarizability; AMOEBA; Affinity prediction; Structure-based drug design

资金

  1. NEI NIH HHS [R01 EY012113] Funding Source: Medline
  2. NIGMS NIH HHS [R01 GM068460, R01 GM106974, R01 GM053630] Funding Source: Medline

向作者/读者索取更多资源

Molecular mechanics attempts to represent intermolecular interactions in terms of classical physics. Initial efforts assumed a point charge located at the atom center and coulombic interactions. It is been recognized over multiple decades that simply representing electrostatics with a charge on each atom failed to reproduce the electrostatic potential surrounding a molecule as estimated by quantum mechanics. Molecular orbitals are not spherically symmetrical, an implicit assumption of monopole electrostatics. This perspective reviews recent evidence that requires use of multipole electrostatics and polarizability in molecular modeling.

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