4.6 Review

Toward a Systems Biology Perspective on Enzyme Evolution

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Biochemistry & Molecular Biology

Divergence and Convergence in Enzyme Evolution: Parallel Evolution of Paraoxonases from Quorum-quenching Lactonases

Mikael Elias et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Article Biochemistry & Molecular Biology

Laboratory evolution of glutathione biosynthesis reveals natural compensatory pathways

Karthik Veeravalli et al.

NATURE CHEMICAL BIOLOGY (2011)

Article Multidisciplinary Sciences

Artificial gene amplification reveals an abundance of promiscuous resistance determinants in Escherichia coli

Valerie W. C. Soo et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Genetics & Heredity

Initial Mutations Direct Alternative Pathways of Protein Evolution

Merijn L. M. Salverda et al.

PLOS GENETICS (2011)

Review Biochemistry & Molecular Biology

Enzyme Promiscuity: A Mechanistic and Evolutionary Perspective

Olga Khersonsky et al.

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)

Article Biochemistry & Molecular Biology

Three serendipitous pathways in E. coli can bypass a block in pyridoxal-5′-phosphate synthesis

Juhan Kim et al.

MOLECULAR SYSTEMS BIOLOGY (2010)

Article Genetics & Heredity

Pervasive Cryptic Epistasis in Molecular Evolution

Mark Lunzer et al.

PLOS GENETICS (2010)

Article Biochemistry & Molecular Biology

Epistasis among Deleterious Mutations in the HIV-1 Protease

Mariona Parera et al.

JOURNAL OF MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Systematic phenome analysis of Escherichia coli multiple-knockout mutants reveals hidden reactions in central carbon metabolism

Kenji Nakahigashi et al.

MOLECULAR SYSTEMS BIOLOGY (2009)

Article Multidisciplinary Sciences

Genome evolution and adaptation in a long-term experiment with Escherichia coli

Jeffrey E. Barrick et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

A metabolic bypass of the triosephosphate isomerase reaction

Kevin K. Desai et al.

BIOCHEMISTRY (2008)

Article Biochemistry & Molecular Biology

Intense neutral drifts yield robust and evolvable consensus proteins

Shimon Bershtein et al.

JOURNAL OF MOLECULAR BIOLOGY (2008)

Article Multidisciplinary Sciences

A compromise required by gene sharing enables survival: Implications for evolution of new enzyme activities

Sean Yu McLoughlin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Biochemistry & Molecular Biology

Multicopy suppression underpins metabolic evolvability

Wayne M. Patrick et al.

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Multidisciplinary Sciences

Identification of functional paralog shift mutations: Conversion of Escherichia coli malate dehydrogenase to a lactate dehydrogenase

Yifeng Yin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Ohno's dilemma: Evolution of new genes under continuous selection

Ulfar Bergthorsson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Latent evolutionary potentials under the neutral mutational drift of an enzyme

Gil Amitai et al.

HFSP JOURNAL (2007)

Article Multidisciplinary Sciences

Multiple high-throughput analyses monitor the response of E-coli to perturbations

Nobuyoshi Ishii et al.

SCIENCE (2007)

Article Multidisciplinary Sciences

Protein stability promotes evolvability

JD Bloom et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Darwinian evolution can follow only very few mutational paths to fitter proteins

DM Weinreich et al.

SCIENCE (2006)

Article Biochemistry & Molecular Biology

The complement of enzymatic sets in different species

S Freilich et al.

JOURNAL OF MOLECULAR BIOLOGY (2005)

Article Biochemistry & Molecular Biology

Identifying latent enzyme activities: Substrate ambiguity within modern bacterial sugar kinases

BG Miller et al.

BIOCHEMISTRY (2004)

Article Chemistry, Multidisciplinary

Conversion of a PLP-dependent racemase into an aldolase by a single active site mutation

FP Seebeck et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)

Article Multidisciplinary Sciences

Directed evolution of a (βα)8-barrel enzyme to catalyze related reactions in two different metabolic pathways

C Jürgens et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Article Biotechnology & Applied Microbiology

Reactions involved in the lower pathway for degradation of 4-nitrotoluene by Mycobacterium strain HL 4-NT-1

ZQ He et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)