4.8 Article

Transcription factor binding dynamics during human ES cell differentiation

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Cell & Tissue Engineering

Reorganization of Enhancer Patterns in Transition from Naive to Primed Pluripotency

Christa Buecker et al.

CELL STEM CELL (2014)

Review Genetics & Heredity

Evolution of transcription factor binding in metazoans - mechanisms and functional implications

Diego Villar et al.

NATURE REVIEWS GENETICS (2014)

Article Multidisciplinary Sciences

Chromatin state dynamics during blood formation

David Lara-Astiaso et al.

SCIENCE (2014)

Article Biochemical Research Methods

Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data

Yanchun Bao et al.

BMC BIOINFORMATICS (2013)

Article Biochemistry & Molecular Biology

Transcriptional and Epigenetic Dynamics during Specification of Human Embryonic Stem Cells

Casey A. Gifford et al.

Article Biochemistry & Molecular Biology

The Cell-Cycle State of Stem Cells Determines Cell Fate Propensity

Siim Pauklin et al.

Article Biochemistry & Molecular Biology

Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

Warren A. Whyte et al.

Article Biochemistry & Molecular Biology

Super-Enhancers in the Control of Cell Identity and Disease

Denes Hnisz et al.

Article Biochemistry & Molecular Biology

DNA-Binding Specificities of Human Transcription Factors

Arttu Jolma et al.

Article Biochemistry & Molecular Biology

Epigenomic Analysis of Multilineage Differentiation of Human Embryonic Stem Cells

Wei Xie et al.

Article Multidisciplinary Sciences

Charting a dynamic DNA methylation landscape of the human genome

Michael J. Ziller et al.

NATURE (2013)

Review Genetics & Heredity

DNA methylation: roles in mammalian development

Zachary D. Smith et al.

NATURE REVIEWS GENETICS (2013)

Review Biochemistry & Molecular Biology

Epigenetic programming and reprogramming during development

Irene Cantone et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)

Article Biochemistry & Molecular Biology

Widespread plasticity in CTCF occupancy linked to DNA methylation

Hao Wang et al.

GENOME RESEARCH (2012)

Article Multidisciplinary Sciences

An expansive human regulatory lexicon encoded in transcription factor footprints

Shane Neph et al.

NATURE (2012)

Article Multidisciplinary Sciences

Architecture of the human regulatory network derived from ENCODE data

Mark B. Gerstein et al.

NATURE (2012)

Article Biochemistry & Molecular Biology

Inferring direct DNA binding from ChIP-seq

Timothy L. Bailey et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

Master Transcription Factors Determine Cell-Type-Specific Responses to TGF-β Signaling

Alan C. Mullen et al.

Article Biochemistry & Molecular Biology

Pluripotency Factors in Embryonic Stem Cells Regulate Differentiation into Germ Layers

Matt Thomson et al.

Article Biochemistry & Molecular Biology

Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis

Noa Novershtern et al.

Review Biochemistry & Molecular Biology

Control of the Embryonic Stem Cell State

Richard A. Young

Article Biochemistry & Molecular Biology

FGF signalling inhibits neural induction in human embryonic stem cells

Boris Greber et al.

EMBO JOURNAL (2011)

Review Cell Biology

Pioneer transcription factors: establishing competence for gene expression

Kenneth S. Zaret et al.

GENES & DEVELOPMENT (2011)

Article Cell Biology

Pluripotency factors regulate definitive endoderm specification through eomesodermin

Adrian Kee Keong Teo et al.

GENES & DEVELOPMENT (2011)

Article Multidisciplinary Sciences

A unique chromatin signature uncovers early developmental enhancers in humans

Alvaro Rada-Iglesias et al.

NATURE (2011)

Article Multidisciplinary Sciences

OCT4 establishes and maintains nucleosome-depleted regions that provide additional layers of epigenetic regulation of its target genes

Jueng Soo You et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Epigenome characterization at single base-pair resolution

Jorja G. Henikoff et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemistry & Molecular Biology

Comparative Epigenomic Analysis of Murine and Human Adipogenesis

Tarjei S. Mikkelsen et al.

Article Biochemical Research Methods

Derivation of neural crest cells from human pluripotent stem cells

Gabsang Lee et al.

NATURE PROTOCOLS (2010)

Article Multidisciplinary Sciences

Mapping the first stages of mesoderm commitment during differentiation of human embryonic stem cells

Denis Evseenko et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biotechnology & Applied Microbiology

Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling

Stuart M. Chambers et al.

NATURE BIOTECHNOLOGY (2009)

Review Genetics & Heredity

Genetic programming of liver and pancreas progenitors: lessons for stem-cell differentiation

Kenneth S. Zaret

NATURE REVIEWS GENETICS (2008)

Article Multidisciplinary Sciences

Highly efficient differentiation of hESCs to functional hepatic endoderm requires ActivinA and Wnt3a signaling

David C. Hay et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Core transcriptional regulatory circuitry in human embryonic stem cells

LA Boyer et al.

Article Neurosciences

Otx2 regulates subtype specification and neurogenesis in the midbrain

B Vernay et al.

JOURNAL OF NEUROSCIENCE (2005)

Article Multidisciplinary Sciences

Transcriptional regulatory code of a eukaryotic genome

CT Harbison et al.

NATURE (2004)

Review Cardiac & Cardiovascular Systems

GATA transcription factors in the developing and adult heart

S Pikkarainen et al.

CARDIOVASCULAR RESEARCH (2004)