4.7 Article

Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biodiversity Conservation

Fish environmental DNA is more concentrated in aquatic sediments than surface water

Cameron R. Turner et al.

BIOLOGICAL CONSERVATION (2015)

Article Biodiversity Conservation

Environmental DNA - An emerging tool in conservation for monitoring past and present biodiversity

Philip Francis Thomsen et al.

BIOLOGICAL CONSERVATION (2015)

Article Biochemistry & Molecular Biology

Tag jumps illuminated - reducing sequence-to-sample misidentifications in metabarcoding studies

Ida Baerholm Schnell et al.

MOLECULAR ECOLOGY RESOURCES (2015)

Article Plant Sciences

Parsing ecological signal from noise in next generation amplicon sequencing

Nhu H. Nguyen et al.

NEW PHYTOLOGIST (2015)

Article Biochemistry & Molecular Biology

Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams

Stephen F. Jane et al.

MOLECULAR ECOLOGY RESOURCES (2015)

Article Engineering, Environmental

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

Matthew A. Barnes et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2014)

Article Multidisciplinary Sciences

Using Environmental DNA to Census Marine Fishes in a Large Mesocosm

Ryan P. Kelly et al.

PLOS ONE (2014)

Article Multidisciplinary Sciences

The Release Rate of Environmental DNA from Juvenile and Adult Fish

Atsushi Maruyama et al.

PLOS ONE (2014)

Article Multidisciplinary Sciences

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

Joel Gibson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Ecology

Environmental DNA for wildlife biology and biodiversity monitoring

Kristine Bohmann et al.

TRENDS IN ECOLOGY & EVOLUTION (2014)

Article Ecology

Particle size distribution and optimal capture of aqueous macrobial eDNA

Cameron R. Turner et al.

METHODS IN ECOLOGY AND EVOLUTION (2014)

Article Fisheries

Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples

David S. Pilliod et al.

CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES (2013)

Article Biochemistry & Molecular Biology

Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?

Bruce E. Deagle et al.

MOLECULAR ECOLOGY RESOURCES (2013)

Article Multidisciplinary Sciences

Using Environmental DNA to Estimate the Distribution of an Invasive Fish Species in Ponds

Teruhiko Takahara et al.

PLOS ONE (2013)

Article Biochemistry & Molecular Biology

Monitoring endangered freshwater biodiversity using environmental DNA

Philip Francis Thomsen et al.

MOLECULAR ECOLOGY (2012)

Editorial Material Biochemistry & Molecular Biology

Environmental DNA

Pierre Taberlet et al.

MOLECULAR ECOLOGY (2012)

Article Multidisciplinary Sciences

Estimation of Fish Biomass Using Environmental DNA

Teruhiko Takahara et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Detection of a Diverse Marine Fish Fauna Using Environmental DNA from Seawater Samples

Philip Francis Thomsen et al.

PLOS ONE (2012)

Article Biochemistry & Molecular Biology

ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis

Tiayyba Riaz et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

PCR Master Mixes Harbour Murine DNA Sequences. Caveat Emptor!

Philip W. Tuke et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

DNA Extraction Columns Contaminated with Murine Sequences

Otto Erlwein et al.

PLOS ONE (2011)

Article Multidisciplinary Sciences

Persistence of Environmental DNA in Freshwater Ecosystems

Tony Dejean et al.

PLOS ONE (2011)

Article Biodiversity Conservation

Sight-unseen detection of rare aquatic species using environmental DNA

Christopher L. Jerde et al.

CONSERVATION LETTERS (2011)

Article Biochemistry & Molecular Biology

Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

Anthony S. Amend et al.

MOLECULAR ECOLOGY (2010)

Article Biochemistry & Molecular Biology

Reproducibility of read numbers in high-throughput sequencing analysis of nematode community composition and structure

Dorota L. Porazinska et al.

MOLECULAR ECOLOGY RESOURCES (2010)

Review Green & Sustainable Science & Technology

Prospects for sustaining freshwater biodiversity in the 21st century: linking ecosystem structure and function

David Dudgeon

CURRENT OPINION IN ENVIRONMENTAL SUSTAINABILITY (2010)

Review Biochemistry & Molecular Biology

Advancing ecological understandings through technological transformations in noninvasive genetics

Albano Beja-Pereira et al.

MOLECULAR ECOLOGY RESOURCES (2009)

Article Biology

Species detection using environmental DNA from water samples

Gentile Francesco Ficetola et al.

BIOLOGY LETTERS (2008)

Article Multidisciplinary Sciences

Global fish production and climate change

K. M. Brander

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Medicine, Legal

Two universal primer sets for species identification among vertebrates

Takashi Kitano et al.

INTERNATIONAL JOURNAL OF LEGAL MEDICINE (2007)

Article Biodiversity Conservation

Designing occupancy studies: general advice and allocating survey effort

DI Mackenzie et al.

JOURNAL OF APPLIED ECOLOGY (2005)

Article Biodiversity Conservation

Scenarios of freshwater fish extinctions from climate change and water withdrawal

MA Xenopoulos et al.

GLOBAL CHANGE BIOLOGY (2005)

Article Biodiversity Conservation

Absent or undetected? Effects of non-detection of species occurrence on wildlife-habitat models

WD Gu et al.

BIOLOGICAL CONSERVATION (2004)

Article Multidisciplinary Sciences

Status and trends of amphibian declines and extinctions worldwide

SN Stuart et al.

SCIENCE (2004)

Article Multidisciplinary Sciences

Explaining the excess of rare species in natural species abundance distributions

AE Magurran et al.

NATURE (2003)

Article Biochemistry & Molecular Biology

OGRe: a relational database for comparative analysis of mitochondrial genomes

D Jameson et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Ecology

Rare species in multivariate analysis for bioassessment: some considerations

Y Cao et al.

JOURNAL OF THE NORTH AMERICAN BENTHOLOGICAL SOCIETY (2001)