相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Soil-Borne Microbiome: Linking Diversity to Function
Lucas W. Mendes et al.
MICROBIAL ECOLOGY (2015)
Acidobacterial community responses to agricultural management of soybean in Amazon forest soils
Acacio A. Navarrete et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
Soil Bacterial Communities Respond to Mowing and Nutrient Addition in a Steppe Ecosystem
Ximei Zhang et al.
PLOS ONE (2013)
Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities
Jorge L. M. Rodrigues et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Shifts in the phylogenetic structure and functional capacity of soil microbial communities follow alteration of native tussock grassland ecosystems
Steven A. Wakelin et al.
SOIL BIOLOGY & BIOCHEMISTRY (2013)
Tropical agricultural land management influences on soil microbial communities through its effect on soil organic carbon
Woo Jun Sul et al.
SOIL BIOLOGY & BIOCHEMISTRY (2013)
Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes
Kelly S. Ramirez et al.
GLOBAL CHANGE BIOLOGY (2012)
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
Noah Fierer et al.
ISME JOURNAL (2012)
Using network analysis to explore co-occurrence patterns in soil microbial communities
Albert Barberan et al.
ISME JOURNAL (2012)
High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes
Jantiya Isanapong et al.
JOURNAL OF BACTERIOLOGY (2012)
Distinct Soil Bacterial Communities Revealed under a Diversely Managed Agroecosystem
Raymon S. Shange et al.
PLOS ONE (2012)
Microbial Co-occurrence Relationships in the Human Microbiome
Karoline Faust et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Cytoscape 2.8: new features for data integration and network visualization
Michael E. Smoot et al.
BIOINFORMATICS (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Studies on the ecology of actinomycetes in an agricultural soil amended with organic residues: I. identification of the dominant groups of Actinomycetales
Mokni-Tlili Sonia et al.
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2011)
Identifying biologically relevant differences between metagenomic communities
Donovan H. Parks et al.
BIOINFORMATICS (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
Micah Hamady et al.
ISME JOURNAL (2010)
Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
Jens Reeder et al.
NATURE METHODS (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
Jeremy Goecks et al.
GENOME BIOLOGY (2010)
Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
Christian L. Lauber et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Changes in land use alter the structure of bacterial communities in Western Amazon soils
Ederson da C. Jesus et al.
ISME JOURNAL (2009)
The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
F. Meyer et al.
BMC BIOINFORMATICS (2008)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Toward an ecological classification of soil bacteria
Noah Fierer et al.
ECOLOGY (2007)
Cropland expansion changes deforestation dynamics in the southern Brazilian Amazon
Douglas C. Morton et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context
Catherine Lozupone et al.
BMC BIOINFORMATICS (2006)
Diversity of Planctomycetes in soil in relation to soil history and environmental heterogeneity
Daniel H. Buckley et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance
Michael Wagner et al.
CURRENT OPINION IN BIOTECHNOLOGY (2006)
Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays
N Fierer et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Regulation of secondary metabolism in streptomycetes
MJ Bibb
CURRENT OPINION IN MICROBIOLOGY (2005)
Succession of bacterial community structure and diversity in a paddy soil oxygen gradient
M Noll et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek et al.
NUCLEIC ACIDS RESEARCH (2005)
The effect of fire on soil organic matter -: a review
JA González-Pérez et al.
ENVIRONMENT INTERNATIONAL (2004)
Finding community structure in very large networks
A Clauset et al.
PHYSICAL REVIEW E (2004)
Toward a mechanistic understanding and prediction of biotic homogenization
JD Olden et al.
AMERICAN NATURALIST (2003)
Soil fertility and biodiversity in organic farming
P Mäder et al.
SCIENCE (2002)
The effects of slash burning on ecosystem nutrients during the land preparation phase of shifting cultivation
CP Giardina et al.
PLANT AND SOIL (2000)