期刊
INSECT MOLECULAR BIOLOGY
卷 19, 期 -, 页码 5-12出版社
WILEY
DOI: 10.1111/j.1365-2583.2009.00930.x
关键词
AphidBase; pea aphid genome; annotation; manual curation; GMOD
资金
- ANR Genoplante 'GnpAnnot'
- American Genetic Association
- NRI
- CSREES
- USDA [2007-04628]
- NIH
- National Library of Medicine
AphidBase is a centralized bioinformatic resource that was developed to facilitate community annotation of the pea aphid genome by the International Aphid Genomics Consortium (IAGC). The AphidBase Information System designed to organize and distribute genomic data and annotations for a large international community was constructed using open source software tools from the Generic Model Organism Database (GMOD). The system includes Apollo and GBrowse utilities as well as a wiki, blast search capabilities and a full text search engine. AphidBase strongly supported community cooperation and coordination in the curation of gene models during community annotation of the pea aphid genome. AphidBase can be accessed at http://www.aphidbase.com.
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